RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C NSI1Q12457 570 aa6.36□□□□□ -1.39
VPS72YDR485C PCD1Q12524 340 aa6.36□□□□□ -1.39
VPS72YDR485C SNF5P18480 905 aa6.35□□□□□ -1.39
VPS72YDR485C SIR1P21691 654 aa6.35□□□□□ -1.39
VPS72YDR485C NUP85P46673 744 aa6.35□□□□□ -1.39
VPS72YDR485C MDE1P47095 244 aa6.35□□□□□ -1.39
VPS72YDR485C ELA1P53861 379 aaPredicted RBP6.35□□□□□ -1.39
VPS72YDR485C CDC19P00549 500 aaKnown RBP6.35□□□□□ -1.39
VPS72YDR485C DBF4P32325 704 aa6.35□□□□□ -1.39
VPS72YDR485C FLR1P38124 548 aa6.35□□□□□ -1.39
VPS72YDR485C FMP10P40098 244 aa6.35□□□□□ -1.39
VPS72YDR485C SAP4P53036 818 aa6.35□□□□□ -1.39
VPS72YDR485C MNT2P53059 558 aa6.35□□□□□ -1.39
VPS72YDR485C TLG1Q03322 224 aa6.35□□□□□ -1.39
VPS72YDR485C IWR1Q07532 353 aaPredicted RBP6.35□□□□□ -1.39
VPS72YDR485C PMS1P14242 873 aa6.34□□□□□ -1.39
VPS72YDR485C ERS1P17261 260 aa6.34□□□□□ -1.39
VPS72YDR485C FRD1P32614 470 aaKnown RBP6.34□□□□□ -1.39
VPS72YDR485C YHR218WP38899 603 aa6.34□□□□□ -1.39
VPS72YDR485C YJL068CP40363 299 aa6.34□□□□□ -1.39
VPS72YDR485C CIR1P42940 261 aa6.34□□□□□ -1.39
VPS72YDR485C PSP1P50896 841 aaKnown RBP6.34□□□□□ -1.39
VPS72YDR485C SOK2P53438 785 aaPredicted RBP6.34□□□□□ -1.39
VPS72YDR485C YNR071CP53757 342 aa6.34□□□□□ -1.39
VPS72YDR485C PRP42Q03776 544 aaKnown RBP6.34□□□□□ -1.39
VPS72YDR485C YPS7Q06325 596 aa6.34□□□□□ -1.39
VPS72YDR485C RCL1Q08096 367 aaPredicted RBP6.34□□□□□ -1.39
VPS72YDR485C ESC8Q08119 714 aa6.34□□□□□ -1.39
VPS72YDR485C RTN2Q12443 393 aa6.34□□□□□ -1.39
VPS72YDR485C GLK1P17709 500 aaKnown RBP6.33□□□□□ -1.4
VPS72YDR485C CTF13P35203 478 aa6.33□□□□□ -1.4
VPS72YDR485C AKL1P38080 1108 aaKnown RBP6.33□□□□□ -1.4
VPS72YDR485C CIT3P43635 486 aa6.33□□□□□ -1.4
VPS72YDR485C YJL045WP47052 634 aa6.33□□□□□ -1.4
VPS72YDR485C AFT1P22149 690 aa6.33□□□□□ -1.4
VPS72YDR485C YLF2P38746 405 aa6.33□□□□□ -1.4
VPS72YDR485C SET5P38890 526 aaKnown RBP6.33□□□□□ -1.4
VPS72YDR485C LEM3P42838 414 aa6.33□□□□□ -1.4
VPS72YDR485C VPS75P53853 264 aa6.33□□□□□ -1.4
VPS72YDR485C YDR341CQ05506 607 aaKnown RBP6.33□□□□□ -1.4
VPS72YDR485C YLR257WQ06146 321 aaKnown RBP6.33□□□□□ -1.4
VPS72YDR485C AVO1Q08236 1176 aa6.33□□□□□ -1.4
VPS72YDR485C ADE3P07245 946 aaKnown RBP6.32□□□□□ -1.4
VPS72YDR485C PFK2P16862 959 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
VPS72YDR485C MDL2P33311 773 aa6.32□□□□□ -1.4
VPS72YDR485C SPO22P40511 975 aa6.32□□□□□ -1.4
VPS72YDR485C SHR5P41912 237 aa6.32□□□□□ -1.4
VPS72YDR485C YFL052WP43551 465 aa6.32□□□□□ -1.4
VPS72YDR485C HFM1P51979 1187 aa6.32□□□□□ -1.4
VPS72YDR485C DUO1P53168 247 aaKnown RBP6.32□□□□□ -1.4
VPS72YDR485C PIL1P53252 339 aaKnown RBP6.32□□□□□ -1.4
VPS72YDR485C SUI3P09064 285 aaKnown RBP6.32□□□□□ -1.4
VPS72YDR485C BRE2P43132 505 aa6.32□□□□□ -1.4
VPS72YDR485C YOR022CQ12204 715 aa6.32□□□□□ -1.4
VPS72YDR485C SEC21P32074 935 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C SAC6P32599 642 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C NPR3P38742 1146 aa6.31□□□□□ -1.4
VPS72YDR485C STP4Q07351 490 aa6.31□□□□□ -1.4
VPS72YDR485C RPS17AP02407 136 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C RPP1AP05318 106 aaPredicted RBP6.31□□□□□ -1.4
VPS72YDR485C RPS17BP14127 136 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C CHL1P22516 861 aaPredicted RBP6.31□□□□□ -1.4
VPS72YDR485C MNE1P24720 663 aa6.31□□□□□ -1.4
VPS72YDR485C ASH1P34233 588 aa6.31□□□□□ -1.4
VPS72YDR485C CEP3P40969 608 aa6.31□□□□□ -1.4
VPS72YDR485C TIM11P81449 96 aaPredicted RBP6.31□□□□□ -1.4
VPS72YDR485C NAM8Q00539 523 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C REX3Q12090 404 aa6.31□□□□□ -1.4
VPS72YDR485C PAR32Q12515 295 aaKnown RBP6.31□□□□□ -1.4
VPS72YDR485C YOL159C-AQ3E769 90 aa6.31□□□□□ -1.4
VPS72YDR485C SES1P07284 462 aaKnown RBP6.3□□□□□ -1.4
VPS72YDR485C MIS1P09440 975 aaKnown RBP6.3□□□□□ -1.4
VPS72YDR485C RRP7P25368 297 aaPredicted RBP6.3□□□□□ -1.4
VPS72YDR485C AIR1P40507 360 aaKnown RBP6.3□□□□□ -1.4
VPS72YDR485C POL31P46957 487 aa6.3□□□□□ -1.4
VPS72YDR485C MRX6P48564 524 aa6.3□□□□□ -1.4
VPS72YDR485C BSC5P53755 489 aa6.3□□□□□ -1.4
VPS72YDR485C XYL2Q07993 356 aa6.3□□□□□ -1.4
VPS72YDR485C AIR2Q12476 344 aaKnown RBP6.3□□□□□ -1.4
VPS72YDR485C POL4P25615 582 aa6.3□□□□□ -1.4
VPS72YDR485C GPI10P30777 616 aa6.3□□□□□ -1.4
VPS72YDR485C DGR2P32330 852 aa6.3□□□□□ -1.4
VPS72YDR485C RPD3P32561 433 aa6.3□□□□□ -1.4
VPS72YDR485C KHA1P40309 873 aa6.3□□□□□ -1.4
VPS72YDR485C SGF73P53165 657 aa6.3□□□□□ -1.4
VPS72YDR485C YSA1Q01976 231 aa6.3□□□□□ -1.4
VPS72YDR485C TY1A-DR2Q03964 440 aaKnown RBP6.3□□□□□ -1.4
VPS72YDR485C KEL3Q08979 651 aaPredicted RBP6.3□□□□□ -1.4
VPS72YDR485C APE1P14904 514 aa6.29□□□□□ -1.4
VPS72YDR485C IME1P21190 360 aa6.29□□□□□ -1.4
VPS72YDR485C IMG2P25642 146 aaPredicted RBP6.29□□□□□ -1.4
VPS72YDR485C ADK2P26364 225 aa6.29□□□□□ -1.4
VPS72YDR485C GIP2P40036 548 aa6.29□□□□□ -1.4
VPS72YDR485C RCR2Q03446 210 aaKnown RBP6.29□□□□□ -1.4
VPS72YDR485C YPR196WQ06595 470 aa6.29□□□□□ -1.4
VPS72YDR485C GCN4P03069 281 aa6.29□□□□□ -1.4
VPS72YDR485C VMA2P16140 517 aaKnown RBP6.29□□□□□ -1.4
VPS72YDR485C RFA1P22336 621 aaKnown RBP6.29□□□□□ -1.4
VPS72YDR485C YSC84P32793 468 aa6.29□□□□□ -1.4
VPS72YDR485C MDL1P33310 695 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms