Protein–RNA interactions for Protein: P35203

CTF13, Centromere DNA-binding protein complex CBF3 subunit C, yeastyeast

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF13P35203 YML009W-BYML009W-B 477 nt20.56■□□□□ 0.88
CTF13P35203 NSR1YGR159C 1245 nt20.45■□□□□ 0.86
CTF13P35203 NOP1YDL014W 984 nt20.03■□□□□ 0.8
CTF13P35203 YKL036CYKL036C 393 nt18.45■□□□□ 0.54
CTF13P35203 MDJ1YFL016C 1536 nt18.12■□□□□ 0.49
CTF13P35203 Q0297Q0297 156 nt17.49■□□□□ 0.39
CTF13P35203 SRX1YKL086W 384 nt17.47■□□□□ 0.39
CTF13P35203 YJL027CYJL027C 417 nt17.22■□□□□ 0.35
CTF13P35203 SCS3YGL126W 1143 nt16.75■□□□□ 0.27
CTF13P35203 YCR051WYCR051W 669 nt16.58■□□□□ 0.24
CTF13P35203 DBP2YNL112W 1641 nt16■□□□□ 0.15
CTF13P35203 YOL085CYOL085C 342 nt15.95■□□□□ 0.14
CTF13P35203 TRN1tP(UGG)A 72 nt15.78■□□□□ 0.12
CTF13P35203 SUF9tP(UGG)F 72 nt15.78■□□□□ 0.12
CTF13P35203 SUF8tP(UGG)H 72 nt15.78■□□□□ 0.12
CTF13P35203 tP(UGG)LtP(UGG)L 72 nt15.78■□□□□ 0.12
CTF13P35203 SUF7tP(UGG)M 72 nt15.78■□□□□ 0.12
CTF13P35203 tP(UGG)N1tP(UGG)N1 72 nt15.78■□□□□ 0.12
CTF13P35203 tP(UGG)N2tP(UGG)N2 72 nt15.78■□□□□ 0.12
CTF13P35203 tP(UGG)O1tP(UGG)O1 72 nt15.78■□□□□ 0.12
CTF13P35203 SUF11tP(UGG)O2 72 nt15.78■□□□□ 0.12
CTF13P35203 RPP1BYDL130W 321 nt15.7■□□□□ 0.1
CTF13P35203 PKP1YIL042C 1185 nt15.7■□□□□ 0.1
CTF13P35203 CCC1YLR220W 969 nt15.64■□□□□ 0.09
CTF13P35203 YBR190WYBR190W 312 nt15.49■□□□□ 0.07
CTF13P35203 RTC3YHR087W 336 nt15.16■□□□□ 0.02
CTF13P35203 RVS167YDR388W 1449 nt15.14■□□□□ 0.01
CTF13P35203 PET122YER153C 765 nt14.98□□□□□ -0.01
CTF13P35203 ATS1YAL020C 1002 nt14.98□□□□□ -0.01
CTF13P35203 SCJ1YMR214W 1134 nt14.96□□□□□ -0.01
CTF13P35203 tP(UGG)O3tP(UGG)O3 72 nt14.93□□□□□ -0.02
CTF13P35203 SCR1SCR1 522 nt14.88□□□□□ -0.03
CTF13P35203 SHR5YOL110W 714 nt14.58□□□□□ -0.08
CTF13P35203 RRN5YLR141W 1092 nt14.55□□□□□ -0.08
CTF13P35203 YDJ1YNL064C 1230 nt14.46□□□□□ -0.09
CTF13P35203 RSB1YOR049C 1065 nt14.27□□□□□ -0.13
CTF13P35203 YER088W-BYER088W-B 147 nt14.25□□□□□ -0.13
CTF13P35203 URN1YPR152C 1398 nt14.17□□□□□ -0.14
CTF13P35203 DEP1YAL013W 1218 nt14.14□□□□□ -0.15
CTF13P35203 GAR1YHR089C 618 nt14.12□□□□□ -0.15
CTF13P35203 RPN10YHR200W 807 nt14.01□□□□□ -0.17
CTF13P35203 PUT4YOR348C 1884 nt14.01□□□□□ -0.17
CTF13P35203 OPI9YLR338W 858 nt13.96□□□□□ -0.17
CTF13P35203 YNL208WYNL208W 600 nt13.96□□□□□ -0.17
CTF13P35203 PST2YDR032C 597 nt13.86□□□□□ -0.19
CTF13P35203 SAH1YER043C 1350 nt13.85□□□□□ -0.19
CTF13P35203 ARE1YCR048W 1833 nt13.76□□□□□ -0.21
CTF13P35203 TIR1YER011W 765 nt13.66□□□□□ -0.22
CTF13P35203 YHR049C-AYHR049C-A 297 nt13.62□□□□□ -0.23
CTF13P35203 POA1YBR022W 534 nt13.6□□□□□ -0.23
CTF13P35203 PUN1YLR414C 792 nt13.59□□□□□ -0.23
CTF13P35203 YJR018WYJR018W 363 nt13.53□□□□□ -0.24
CTF13P35203 SSA1YAL005C 1929 nt13.46□□□□□ -0.25
CTF13P35203 PTC2YER089C 1395 nt13.39□□□□□ -0.27
CTF13P35203 YKL097CYKL097C 411 nt13.35□□□□□ -0.27
CTF13P35203 BUD23YCR047C 828 nt13.32□□□□□ -0.28
CTF13P35203 RPP2BYDR382W 333 nt13.3□□□□□ -0.28
CTF13P35203 SHU1YHL006C 453 nt13.3□□□□□ -0.28
CTF13P35203 BSC6YOL137W 1494 nt13.29□□□□□ -0.28
CTF13P35203 YJR120WYJR120W 351 nt13.24□□□□□ -0.29
CTF13P35203 NAB2YGL122C 1578 nt13.24□□□□□ -0.29
CTF13P35203 SRB2YHR041C 633 nt13.17□□□□□ -0.3
CTF13P35203 YAL037C-BYAL037C-B 975 nt13.09□□□□□ -0.31
CTF13P35203 INM2YDR287W 879 nt13.07□□□□□ -0.32
CTF13P35203 DAL1YIR027C 1383 nt13.06□□□□□ -0.32
CTF13P35203 WWM1YFL010C 636 nt13.04□□□□□ -0.32
CTF13P35203 FPR4YLR449W 1179 nt13.04□□□□□ -0.32
CTF13P35203 YGR021WYGR021W 873 nt13.01□□□□□ -0.33
CTF13P35203 FIS1YIL065C 468 nt13□□□□□ -0.33
CTF13P35203 BDH2YAL061W 1254 nt12.99□□□□□ -0.33
CTF13P35203 SSA3YBL075C 1950 nt12.99□□□□□ -0.33
CTF13P35203 YBL100CYBL100C 315 nt12.93□□□□□ -0.34
CTF13P35203 PHO4YFR034C 939 nt12.92□□□□□ -0.34
CTF13P35203 HOM6YJR139C 1080 nt12.91□□□□□ -0.34
CTF13P35203 YFL021C-AYFL021C-A 855 nt12.86□□□□□ -0.35
CTF13P35203 MNP1YGL068W 585 nt12.84□□□□□ -0.35
CTF13P35203 LSM3YLR438C-A 270 nt12.83□□□□□ -0.36
CTF13P35203 Q0182Q0182 405 nt12.77□□□□□ -0.37
CTF13P35203 TRM9YML014W 840 nt12.77□□□□□ -0.37
CTF13P35203 YOR139CYOR139C 393 nt12.76□□□□□ -0.37
CTF13P35203 FUN26YAL022C 1554 nt12.76□□□□□ -0.37
CTF13P35203 RKM5YLR137W 1104 nt12.74□□□□□ -0.37
CTF13P35203 NPL3YDR432W 1245 nt12.73□□□□□ -0.37
CTF13P35203 YOL037CYOL037C 354 nt12.68□□□□□ -0.38
CTF13P35203 YPS1YLR120C 1710 nt12.65□□□□□ -0.38
CTF13P35203 ALF1YNL148C 765 nt12.63□□□□□ -0.39
CTF13P35203 CCT6YDR188W 1641 nt12.61□□□□□ -0.39
CTF13P35203 YDR095CYDR095C 411 nt12.58□□□□□ -0.4
CTF13P35203 SPT5YML010W 3192 nt12.57□□□□□ -0.4
CTF13P35203 SUF2tP(AGG)C 72 nt12.55□□□□□ -0.4
CTF13P35203 SUF10tP(AGG)N 72 nt12.55□□□□□ -0.4
CTF13P35203 YHR165W-AYHR165W-A 312 nt12.55□□□□□ -0.4
CTF13P35203 MEP2YNL142W 1500 nt12.48□□□□□ -0.41
CTF13P35203 SIS1YNL007C 1059 nt12.38□□□□□ -0.43
CTF13P35203 RPP2AYOL039W 321 nt12.37□□□□□ -0.43
CTF13P35203 YLR281CYLR281C 468 nt12.35□□□□□ -0.43
CTF13P35203 WHI5YOR083W 888 nt12.32□□□□□ -0.44
CTF13P35203 YLR154C-GYLR154C-G 150 nt12.3□□□□□ -0.44
CTF13P35203 tM(CAU)CtM(CAU)C 72 nt12.28□□□□□ -0.44
CTF13P35203 IMT4tM(CAU)E 72 nt12.28□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms