RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	KAE1	P36132	386 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	STV1	P37296	890 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	PHO88	P38264	188 aa	Predicted RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	FZO1	P38297	855 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	ECM1	P39715	212 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	HMF1	P40037	129 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	LCP5	P40079	357 aa	Predicted RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	FTR1	P40088	404 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	PRK1	P40494	810 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	SDS3	P40505	327 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	URB2	P47108	1174 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	PCL10	P53124	433 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	MDR1	P53258	950 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	NOG2	P53742	486 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	ESBP6	P53918	673 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	ORC4	P54791	529 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	RPA49	Q01080	415 aa	Predicted RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	VPS72	Q03388	795 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	ATG16	Q03818	150 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	MSH6	Q03834	1242 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	IVY1	Q04934	453 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	DON1	Q05610	365 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	FUS2	Q05670	677 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	SFH1	Q06168	426 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	HDA3	Q06623	655 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	SHS1	Q07657	551 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	YOR059C	Q08448	450 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	TCO89	Q08921	799 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	TAF10	Q12030	206 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	YLR122C	Q12312	125 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	TRP2	P00899	507 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	THS1	P04801	734 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	TUP1	P16649	713 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	SRV2	P17555	526 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	PWP1	P21304	576 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	DAL2	P25335	343 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	SNT1	P25357	1226 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	PER1	P25625	357 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	MSH1	P25846	959 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	MGT1	P26188	188 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
PSF1	YDR013W	GCG1	P32656	232 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	SKG6	P32900	734 aa	Predicted RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	YBL055C	P34220	418 aa	Predicted RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	PEX5	P35056	612 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
PSF1	YDR013W	NCL1	P38205	684 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	APM2	P38700	605 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	CCC2	P38995	1004 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	RIO2	P40160	425 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	YMR134W	P40207	237 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	FIS1	P40515	155 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	AIM21	P40563	679 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	ACF4	P47129	309 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	SHE10	P53075	577 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	RTT102	P53330	157 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	YNL165W	P53891	406 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	PTA1	Q01329	785 aa	Predicted RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
PSF1	YDR013W	SHR3	Q02774	210 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	DIG1	Q03063	452 aa	Known RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	SLD5	Q03406	294 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	RKM2	Q03942	479 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	GTB1	Q04924	702 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	YPQ2	Q06328	317 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	CUR1	Q06469	252 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	IWR1	Q07532	353 aa	Predicted RBP	3.48	□□□□□ -1.85
PSF1	YDR013W	ADY3	Q07732	790 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	MDM38	Q08179	573 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	RUP1	Q12242	671 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	RMP1	Q12530	201 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	YOL087C	Q99247	1116 aa		3.48	□□□□□ -1.85
PSF1	YDR013W	YER152C	P10356	443 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	ERG11	P10614	530 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	NAT1	P12945	854 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	KAR4	P25583	335 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	AAD3	P25612	363 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	EFT1	P32324	842 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	COT1	P32798	439 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	YEL1	P34225	687 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	MCR1	P36060	302 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	HEL1	P36113	551 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	REG2	P38232	338 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	VID24	P38263	362 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	YSW1	P38280	609 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	MED8	P38304	223 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	MSG5	P38590	489 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	LIN1	P38852	340 aa	Predicted RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	KEL1	P38853	1164 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	UTP9	P38882	575 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	GEM1	P39722	662 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	UBP5	P39944	805 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	NPP2	P39997	493 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	GPD2	P41911	440 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	YNL320W	P42840	284 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	TAF1	P46677	1066 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	CPR7	P47103	393 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	RNR4	P49723	345 aa	Known RBP	3.47	□□□□□ -1.85
PSF1	YDR013W	CUL3	P53202	744 aa		3.47	□□□□□ -1.85
PSF1	YDR013W	NNF2	P53253	936 aa		3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 111.5 ms