RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W RPT2P40327 437 aaKnown RBP6.72□□□□□ -1.33
TRP1YDR007W TAF1P46677 1066 aa6.72□□□□□ -1.33
TRP1YDR007W IML2P47031 731 aa6.72□□□□□ -1.33
TRP1YDR007W PUS4P48567 403 aaKnown RBP6.72□□□□□ -1.33
TRP1YDR007W EAF7P53911 425 aaKnown RBP6.72□□□□□ -1.33
TRP1YDR007W MCM21Q06675 368 aa6.72□□□□□ -1.33
TRP1YDR007W PEX19Q07418 342 aa6.72□□□□□ -1.33
TRP1YDR007W THO2P53552 1597 aaKnown RBP6.72□□□□□ -1.33
TRP1YDR007W RPA135P22138 1203 aaKnown RBP6.71□□□□□ -1.34
TRP1YDR007W PUB1P32588 453 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
TRP1YDR007W SIC1P38634 284 aa6.71□□□□□ -1.34
TRP1YDR007W ECM1P39715 212 aa6.71□□□□□ -1.34
TRP1YDR007W SSP120P39931 234 aaKnown RBP6.71□□□□□ -1.34
TRP1YDR007W ERR3P42222 437 aa6.71□□□□□ -1.34
TRP1YDR007W COX18P53239 316 aa6.71□□□□□ -1.34
TRP1YDR007W VPS62P53285 467 aa6.71□□□□□ -1.34
TRP1YDR007W MOT3P54785 490 aaKnown RBP6.71□□□□□ -1.34
TRP1YDR007W DUS4Q06063 367 aa6.71□□□□□ -1.34
TRP1YDR007W BLS1Q06071 122 aa6.71□□□□□ -1.34
TRP1YDR007W COG4Q06096 861 aa6.71□□□□□ -1.34
TRP1YDR007W NOP12Q08208 459 aaKnown RBP6.71□□□□□ -1.34
TRP1YDR007W NPC2Q12408 173 aa6.71□□□□□ -1.34
TRP1YDR007W ECM5Q03214 1411 aa6.7□□□□□ -1.34
TRP1YDR007W VAS1P07806 1104 aaKnown RBP6.7□□□□□ -1.34
TRP1YDR007W CDC6P09119 513 aa6.7□□□□□ -1.34
TRP1YDR007W TAF5P38129 798 aa6.7□□□□□ -1.34
TRP1YDR007W APM3P38153 483 aa6.7□□□□□ -1.34
TRP1YDR007W YHR112CP38716 378 aa6.7□□□□□ -1.34
TRP1YDR007W PXA1P41909 870 aa6.7□□□□□ -1.34
TRP1YDR007W VBA4Q04602 768 aaKnown RBP6.7□□□□□ -1.34
TRP1YDR007W BRE4Q07660 1125 aa6.7□□□□□ -1.34
TRP1YDR007W DNA2P38859 1522 aa6.7□□□□□ -1.34
TRP1YDR007W ADH4P10127 382 aa6.69□□□□□ -1.34
TRP1YDR007W IME1P21190 360 aa6.69□□□□□ -1.34
TRP1YDR007W SHM2P37291 469 aaKnown RBP6.69□□□□□ -1.34
TRP1YDR007W YHR033WP38690 423 aa6.69□□□□□ -1.34
TRP1YDR007W RPP1P38786 293 aa6.69□□□□□ -1.34
TRP1YDR007W CTH1P47976 325 aa6.69□□□□□ -1.34
TRP1YDR007W TAF4P50105 388 aa6.69□□□□□ -1.34
TRP1YDR007W MRPL22P53881 309 aa6.69□□□□□ -1.34
TRP1YDR007W NRG1Q03125 231 aa6.69□□□□□ -1.34
TRP1YDR007W RCR2Q03446 210 aaKnown RBP6.69□□□□□ -1.34
TRP1YDR007W NSE5Q03718 556 aa6.69□□□□□ -1.34
TRP1YDR007W PPN1Q04119 674 aa6.69□□□□□ -1.34
TRP1YDR007W ACK1Q07622 623 aaPredicted RBP6.69□□□□□ -1.34
TRP1YDR007W MCH5Q08777 521 aa6.69□□□□□ -1.34
TRP1YDR007W ERG20P08524 352 aaKnown RBP6.68□□□□□ -1.34
TRP1YDR007W CBP3P21560 335 aa6.68□□□□□ -1.34
TRP1YDR007W RPN12P32496 274 aa6.68□□□□□ -1.34
TRP1YDR007W IME2P32581 645 aa6.68□□□□□ -1.34
TRP1YDR007W BEM3P32873 1128 aa6.68□□□□□ -1.34
TRP1YDR007W PPE1P38796 400 aa6.68□□□□□ -1.34
TRP1YDR007W YNL195CP40168 261 aa6.68□□□□□ -1.34
TRP1YDR007W BUD8P41698 603 aa6.68□□□□□ -1.34
TRP1YDR007W MAD3P47074 515 aa6.68□□□□□ -1.34
TRP1YDR007W CCT8P47079 568 aaKnown RBP6.68□□□□□ -1.34
TRP1YDR007W GTR1Q00582 310 aa6.68□□□□□ -1.34
TRP1YDR007W GCN5Q03330 439 aa6.68□□□□□ -1.34
TRP1YDR007W YAP6Q03935 383 aa6.68□□□□□ -1.34
TRP1YDR007W CIA1Q05583 330 aa6.68□□□□□ -1.34
TRP1YDR007W VPS36Q06696 566 aa6.68□□□□□ -1.34
TRP1YDR007W SSP2Q08646 371 aa6.68□□□□□ -1.34
TRP1YDR007W RTK1Q12100 620 aaPredicted RBP6.68□□□□□ -1.34
TRP1YDR007W TRM11Q12463 433 aa6.68□□□□□ -1.34
TRP1YDR007W VPS5Q92331 675 aa6.68□□□□□ -1.34
TRP1YDR007W SSK2P53599 1579 aa6.67□□□□□ -1.34
TRP1YDR007W PRP22P24384 1145 aaKnown RBP6.67□□□□□ -1.34
TRP1YDR007W GFD2P25370 566 aaKnown RBP6.67□□□□□ -1.34
TRP1YDR007W LIP5P32875 414 aa6.67□□□□□ -1.34
TRP1YDR007W PRS1P32895 427 aaKnown RBP6.67□□□□□ -1.34
TRP1YDR007W SWD1P39706 426 aa6.67□□□□□ -1.34
TRP1YDR007W SLU7Q02775 382 aaKnown RBP6.67□□□□□ -1.34
TRP1YDR007W TRS130Q03660 1102 aa6.67□□□□□ -1.34
TRP1YDR007W HMO1Q03973 246 aaKnown RBP6.67□□□□□ -1.34
TRP1YDR007W GAD1Q04792 585 aa6.67□□□□□ -1.34
TRP1YDR007W SPT7P35177 1332 aa6.67□□□□□ -1.34
TRP1YDR007W SSM4P40318 1319 aa6.67□□□□□ -1.34
TRP1YDR007W RNR1P21524 888 aaKnown RBP6.66□□□□□ -1.34
TRP1YDR007W DEF1P35732 738 aaKnown RBP6.66□□□□□ -1.34
TRP1YDR007W POL12P38121 705 aaPredicted RBP6.66□□□□□ -1.34
TRP1YDR007W PLB1P39105 664 aa6.66□□□□□ -1.34
TRP1YDR007W MAD2P40958 196 aa6.66□□□□□ -1.34
TRP1YDR007W MNT2P53059 558 aa6.66□□□□□ -1.34
TRP1YDR007W SQS1P53866 767 aaKnown RBP6.66□□□□□ -1.34
TRP1YDR007W DFG16Q99234 619 aa6.66□□□□□ -1.34
TRP1YDR007W CAD1P24813 409 aaKnown RBP6.65□□□□□ -1.34
TRP1YDR007W CDC20P26309 610 aa6.65□□□□□ -1.34
TRP1YDR007W CTF13P35203 478 aa6.65□□□□□ -1.34
TRP1YDR007W PSY4P38193 441 aa6.65□□□□□ -1.34
TRP1YDR007W CCT3P39077 534 aaKnown RBP6.65□□□□□ -1.34
TRP1YDR007W SPC72P39723 622 aa6.65□□□□□ -1.34
TRP1YDR007W BIT61P47041 543 aa6.65□□□□□ -1.34
TRP1YDR007W UBA2P52488 636 aa6.65□□□□□ -1.34
TRP1YDR007W DIA2Q08496 732 aaPredicted RBP6.65□□□□□ -1.34
TRP1YDR007W TGL5Q12043 749 aa6.65□□□□□ -1.34
TRP1YDR007W DIN7Q12086 430 aa6.65□□□□□ -1.34
TRP1YDR007W IKI3Q06706 1349 aaKnown RBP6.65□□□□□ -1.35
TRP1YDR007W KIN82P25341 720 aa6.64□□□□□ -1.35
TRP1YDR007W CWH43P25618 953 aa6.64□□□□□ -1.35
TRP1YDR007W YPT7P32939 208 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms