RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C LYS14P40971 790 aa2.39□□□□□ -2.03
SSD1YDR293C ZPR1P53303 486 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C SPP382Q06411 708 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C ATG23Q06671 453 aa2.39□□□□□ -2.03
SSD1YDR293C FLO11P08640 1367 aa2.39□□□□□ -2.03
SSD1YDR293C AFT1P22149 690 aa2.39□□□□□ -2.03
SSD1YDR293C RIT1P23796 513 aa2.39□□□□□ -2.03
SSD1YDR293C MSH1P25846 959 aa2.39□□□□□ -2.03
SSD1YDR293C SWI3P32591 825 aa2.39□□□□□ -2.03
SSD1YDR293C GCG1P32656 232 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C YKU70P32807 602 aa2.39□□□□□ -2.03
SSD1YDR293C MIP6P38760 659 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C EFM4P40516 257 aa2.39□□□□□ -2.03
SSD1YDR293C VID28P40547 921 aa2.39□□□□□ -2.03
SSD1YDR293C RPN11P43588 306 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C RPC17P47076 161 aa2.39□□□□□ -2.03
SSD1YDR293C ILM1P47155 203 aa2.39□□□□□ -2.03
SSD1YDR293C YGR153WP48238 217 aa2.39□□□□□ -2.03
SSD1YDR293C CAF130P53280 1122 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C RPA49Q01080 415 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C SHR3Q02774 210 aa2.39□□□□□ -2.03
SSD1YDR293C UME1Q03010 460 aa2.39□□□□□ -2.03
SSD1YDR293C SPO19Q03029 223 aa2.39□□□□□ -2.03
SSD1YDR293C RMD1Q03441 430 aa2.39□□□□□ -2.03
SSD1YDR293C YOR378WQ08902 515 aa2.39□□□□□ -2.03
SSD1YDR293C YPL277CQ08989 487 aa2.39□□□□□ -2.03
SSD1YDR293C SEY1Q99287 776 aa2.39□□□□□ -2.03
SSD1YDR293C CDC19P00549 500 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C SRD1P09007 221 aa2.39□□□□□ -2.03
SSD1YDR293C MRPL25P23369 157 aa2.39□□□□□ -2.03
SSD1YDR293C CLB1P24868 471 aa2.39□□□□□ -2.03
SSD1YDR293C DPH2P32461 534 aa2.39□□□□□ -2.03
SSD1YDR293C ABZ1P37254 787 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C AHP1P38013 176 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C HXT5P38695 592 aa2.39□□□□□ -2.03
SSD1YDR293C BEM4P39011 633 aa2.39□□□□□ -2.03
SSD1YDR293C UTP18P40362 594 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C SHQ1P40486 507 aaPredicted RBP2.39□□□□□ -2.03
SSD1YDR293C RGD2P43556 714 aa2.39□□□□□ -2.03
SSD1YDR293C ERP6P53198 216 aa2.39□□□□□ -2.03
SSD1YDR293C RCF2P53721 224 aa2.39□□□□□ -2.03
SSD1YDR293C CBK1P53894 756 aa2.39□□□□□ -2.03
SSD1YDR293C EBS1Q03466 884 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C SPC24Q04477 213 aa2.39□□□□□ -2.03
SSD1YDR293C NHA1Q99271 985 aa2.39□□□□□ -2.03
SSD1YDR293C RAD53P22216 821 aa2.38□□□□□ -2.03
SSD1YDR293C GSY1P23337 708 aa2.38□□□□□ -2.03
SSD1YDR293C XRS2P33301 854 aa2.38□□□□□ -2.03
SSD1YDR293C DUT1P33317 147 aa2.38□□□□□ -2.03
SSD1YDR293C IRS4P36115 615 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C YMC2P38087 329 aa2.38□□□□□ -2.03
SSD1YDR293C FTR1P40088 404 aa2.38□□□□□ -2.03
SSD1YDR293C UBC9P50623 157 aaPredicted RBP2.38□□□□□ -2.03
SSD1YDR293C PPT1P53043 513 aa2.38□□□□□ -2.03
SSD1YDR293C CWC22P53333 577 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C TLG2Q08144 397 aa2.38□□□□□ -2.03
SSD1YDR293C MDM38Q08179 573 aa2.38□□□□□ -2.03
SSD1YDR293C SMC5Q08204 1093 aa2.38□□□□□ -2.03
SSD1YDR293C NBA1Q08229 501 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C TY4A-HQ6Q5P6 413 aa2.38□□□□□ -2.03
SSD1YDR293C ADE3P07245 946 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C PFK1P16861 987 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C SPO16P17122 198 aa2.38□□□□□ -2.03
SSD1YDR293C LCB1P25045 558 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C CDC15P27636 974 aa2.38□□□□□ -2.03
SSD1YDR293C MLS1P30952 554 aa2.38□□□□□ -2.03
SSD1YDR293C FRD1P32614 470 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C CBF5P33322 483 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SSD1YDR293C REI1P38344 393 aaPredicted RBP2.38□□□□□ -2.03
SSD1YDR293C GPB2P39717 880 aa2.38□□□□□ -2.03
SSD1YDR293C NPR2P39923 615 aa2.38□□□□□ -2.03
SSD1YDR293C DOT6P40059 670 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C IES5P40060 125 aa2.38□□□□□ -2.03
SSD1YDR293C GPP1P41277 250 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C UBP15P50101 1230 aa2.38□□□□□ -2.03
SSD1YDR293C VPS30Q02948 557 aa2.38□□□□□ -2.03
SSD1YDR293C IRC4Q03036 179 aa2.38□□□□□ -2.03
SSD1YDR293C CRR1Q05790 422 aa2.38□□□□□ -2.03
SSD1YDR293C ECI1Q05871 280 aa2.38□□□□□ -2.03
SSD1YDR293C UTP13Q05946 817 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C DUS3Q06053 668 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C PSR1Q07800 427 aa2.38□□□□□ -2.03
SSD1YDR293C YAP7Q08182 245 aa2.38□□□□□ -2.03
SSD1YDR293C ALG6Q12001 544 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C RRP6Q12149 733 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C YOL087CQ99247 1116 aa2.38□□□□□ -2.03
SSD1YDR293C DUR1,2P32528 1835 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C FLP1P03870 423 aa2.38□□□□□ -2.03
SSD1YDR293C SBP1P10080 294 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C NPR1P22211 790 aa2.38□□□□□ -2.03
SSD1YDR293C RET1P22276 1149 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C TRZ1P36159 838 aaPredicted RBP2.38□□□□□ -2.03
SSD1YDR293C DYS1P38791 387 aa2.38□□□□□ -2.03
SSD1YDR293C GDH3P39708 457 aa2.38□□□□□ -2.03
SSD1YDR293C NPP2P39997 493 aa2.38□□□□□ -2.03
SSD1YDR293C YTA12P40341 825 aa2.38□□□□□ -2.03
SSD1YDR293C INA22P40576 216 aa2.38□□□□□ -2.03
SSD1YDR293C FET4P40988 552 aa2.38□□□□□ -2.03
SSD1YDR293C YJL171CP46992 396 aa2.38□□□□□ -2.03
SSD1YDR293C CCM1P48237 864 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms