RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W SKG6P32900 734 aaPredicted RBP7.23□□□□□ -1.25
SWD1YAR003W AHP1P38013 176 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W KSP1P38691 1029 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W SSB2P40150 613 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W ALA1P40825 983 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W SCD6P45978 349 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
SWD1YAR003W SCS3P53012 380 aa7.23□□□□□ -1.25
SWD1YAR003W CAF130P53280 1122 aaPredicted RBP7.23□□□□□ -1.25
SWD1YAR003W TPO2P53283 614 aa7.23□□□□□ -1.25
SWD1YAR003W ULP1Q02724 621 aa7.23□□□□□ -1.25
SWD1YAR003W VTC3Q02725 835 aa7.23□□□□□ -1.25
SWD1YAR003W ESC2Q06340 456 aa7.23□□□□□ -1.25
SWD1YAR003W YCG1Q06680 1035 aa7.23□□□□□ -1.25
SWD1YAR003W RLP24Q07915 199 aaKnown RBP7.23□□□□□ -1.25
SWD1YAR003W IES4Q08561 116 aa7.23□□□□□ -1.25
SWD1YAR003W ATG11Q12527 1178 aa7.23□□□□□ -1.25
SWD1YAR003W TSC13Q99190 310 aa7.23□□□□□ -1.25
SWD1YAR003W CCP1P00431 361 aa7.22□□□□□ -1.25
SWD1YAR003W WHI2P12611 486 aa7.22□□□□□ -1.25
SWD1YAR003W PHO13P19881 312 aa7.22□□□□□ -1.25
SWD1YAR003W SPO11P23179 398 aa7.22□□□□□ -1.25
SWD1YAR003W TRK2P28584 889 aa7.22□□□□□ -1.25
SWD1YAR003W DPH2P32461 534 aa7.22□□□□□ -1.25
SWD1YAR003W MUD1P32605 298 aaKnown RBP7.22□□□□□ -1.25
SWD1YAR003W NIP100P33420 868 aa7.22□□□□□ -1.25
SWD1YAR003W YKL023WP36103 277 aaKnown RBP7.22□□□□□ -1.25
SWD1YAR003W LDH1P38139 375 aa7.22□□□□□ -1.25
SWD1YAR003W EFM2P38347 419 aa7.22□□□□□ -1.25
SWD1YAR003W ERC1P38767 581 aa7.22□□□□□ -1.25
SWD1YAR003W CUL3P53202 744 aa7.22□□□□□ -1.25
SWD1YAR003W TAM41P53230 385 aa7.22□□□□□ -1.25
SWD1YAR003W YNL146WP53906 100 aa7.22□□□□□ -1.25
SWD1YAR003W TIM8P57744 87 aa7.22□□□□□ -1.25
SWD1YAR003W NAM8Q00539 523 aaKnown RBP7.22□□□□□ -1.25
SWD1YAR003W VPS72Q03388 795 aa7.22□□□□□ -1.25
SWD1YAR003W HPF1Q05164 967 aa7.22□□□□□ -1.25
SWD1YAR003W DON1Q05610 365 aa7.22□□□□□ -1.25
SWD1YAR003W YPR078CQ06813 372 aa7.22□□□□□ -1.25
SWD1YAR003W MDM20Q12387 796 aaKnown RBP7.22□□□□□ -1.25
SWD1YAR003W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
SWD1YAR003W MSS51P32335 436 aa7.21□□□□□ -1.26
SWD1YAR003W BCS1P32839 456 aa7.21□□□□□ -1.26
SWD1YAR003W BUD2P33314 1104 aa7.21□□□□□ -1.26
SWD1YAR003W KTR2P33550 425 aa7.21□□□□□ -1.26
SWD1YAR003W YEL1P34225 687 aa7.21□□□□□ -1.26
SWD1YAR003W MNN4P36044 1178 aa7.21□□□□□ -1.26
SWD1YAR003W SMC2P38989 1170 aaKnown RBP7.21□□□□□ -1.26
SWD1YAR003W AIM21P40563 679 aa7.21□□□□□ -1.26
SWD1YAR003W OPY2Q06810 360 aa7.21□□□□□ -1.26
SWD1YAR003W RRP6Q12149 733 aaKnown RBP7.21□□□□□ -1.26
SWD1YAR003W ECM29P38737 1868 aa7.2□□□□□ -1.26
SWD1YAR003W RPS6AP0CX37 236 aaKnown RBP7.2□□□□□ -1.26
SWD1YAR003W RPS6BP0CX38 236 aaPredicted RBP7.2□□□□□ -1.26
SWD1YAR003W XRS2P33301 854 aa7.2□□□□□ -1.26
SWD1YAR003W DUR3P33413 735 aa7.2□□□□□ -1.26
SWD1YAR003W MFT1P33441 392 aaKnown RBP7.2□□□□□ -1.26
SWD1YAR003W PIN4P34217 668 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
SWD1YAR003W VID24P38263 362 aa7.2□□□□□ -1.26
SWD1YAR003W NPP2P39997 493 aa7.2□□□□□ -1.26
SWD1YAR003W ALD5P40047 520 aaKnown RBP7.2□□□□□ -1.26
SWD1YAR003W UTP14Q04500 899 aaKnown RBP7.2□□□□□ -1.26
SWD1YAR003W ATG9Q12142 997 aa7.2□□□□□ -1.26
SWD1YAR003W NAT1P12945 854 aaKnown RBP7.19□□□□□ -1.26
SWD1YAR003W UIP5P36137 443 aa7.19□□□□□ -1.26
SWD1YAR003W RTT107P38850 1070 aa7.19□□□□□ -1.26
SWD1YAR003W VFA1P40080 203 aa7.19□□□□□ -1.26
SWD1YAR003W KTR7P40504 517 aa7.19□□□□□ -1.26
SWD1YAR003W LCB2P40970 561 aa7.19□□□□□ -1.26
SWD1YAR003W OSW7P43611 510 aa7.19□□□□□ -1.26
SWD1YAR003W HSH155P49955 971 aaKnown RBP7.19□□□□□ -1.26
SWD1YAR003W CUS1Q02554 436 aaPredicted RBP7.19□□□□□ -1.26
SWD1YAR003W UTP5Q04177 643 aaKnown RBP7.19□□□□□ -1.26
SWD1YAR003W YLR297WQ05899 129 aa7.19□□□□□ -1.26
SWD1YAR003W ECM7Q06200 448 aa7.19□□□□□ -1.26
SWD1YAR003W HMI1Q12039 706 aa7.19□□□□□ -1.26
SWD1YAR003W CWC2Q12046 339 aaPredicted RBP7.19□□□□□ -1.26
SWD1YAR003W TY1A-DR3Q12441 440 aa7.19□□□□□ -1.26
SWD1YAR003W PHO87P25360 923 aa7.18□□□□□ -1.26
SWD1YAR003W TMT1P32643 299 aa7.18□□□□□ -1.26
SWD1YAR003W SMC1P32908 1225 aa7.18□□□□□ -1.26
SWD1YAR003W SHM1P37292 490 aaPredicted RBP7.18□□□□□ -1.26
SWD1YAR003W MMS4P38257 691 aa7.18□□□□□ -1.26
SWD1YAR003W UBP5P39944 805 aa7.18□□□□□ -1.26
SWD1YAR003W FTR1P40088 404 aa7.18□□□□□ -1.26
SWD1YAR003W ASN1P49089 572 aaKnown RBP7.18□□□□□ -1.26
SWD1YAR003W AZR1P50080 613 aa7.18□□□□□ -1.26
SWD1YAR003W LYS5P50113 272 aa7.18□□□□□ -1.26
SWD1YAR003W CWC21Q03375 135 aaKnown RBP7.18□□□□□ -1.26
SWD1YAR003W CEF1Q03654 590 aaPredicted RBP7.18□□□□□ -1.26
SWD1YAR003W TRS130Q03660 1102 aa7.18□□□□□ -1.26
SWD1YAR003W VPS38Q05919 439 aa7.18□□□□□ -1.26
SWD1YAR003W YPQ2Q06328 317 aa7.18□□□□□ -1.26
SWD1YAR003W SHS1Q07657 551 aa7.18□□□□□ -1.26
SWD1YAR003W CDC53Q12018 815 aaKnown RBP7.18□□□□□ -1.26
SWD1YAR003W FAL1Q12099 399 aaKnown RBP7.18□□□□□ -1.26
SWD1YAR003W HEM1P09950 548 aaPredicted RBP7.17□□□□□ -1.26
SWD1YAR003W HAP4P14064 554 aa7.17□□□□□ -1.26
SWD1YAR003W RRP43P25359 394 aaPredicted RBP7.17□□□□□ -1.26
SWD1YAR003W SWI3P32591 825 aa7.17□□□□□ -1.26
SWD1YAR003W JNM1P36224 373 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms