Protein–RNA interactions for Protein: P40825

ALA1, Alanine--tRNA ligase, mitochondrial, yeastyeast

Known RBP Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ALA1P40825 NSR1YGR159C 1245 nt20.75■□□□□ 0.91
ALA1P40825 YML009W-BYML009W-B 477 nt20.65■□□□□ 0.9
ALA1P40825 NOP1YDL014W 984 nt19.88■□□□□ 0.77
ALA1P40825 MDJ1YFL016C 1536 nt18.79■□□□□ 0.6
ALA1P40825 YKL036CYKL036C 393 nt18.09■□□□□ 0.49
ALA1P40825 SRX1YKL086W 384 nt17.41■□□□□ 0.38
ALA1P40825 Q0297Q0297 156 nt17.34■□□□□ 0.37
ALA1P40825 YJL027CYJL027C 417 nt17.25■□□□□ 0.35
ALA1P40825 DBP2YNL112W 1641 nt16.53■□□□□ 0.24
ALA1P40825 YCR051WYCR051W 669 nt16.49■□□□□ 0.23
ALA1P40825 SCS3YGL126W 1143 nt16.35■□□□□ 0.21
ALA1P40825 YBR190WYBR190W 312 nt16.04■□□□□ 0.16
ALA1P40825 TRN1tP(UGG)A 72 nt15.96■□□□□ 0.15
ALA1P40825 SUF9tP(UGG)F 72 nt15.96■□□□□ 0.15
ALA1P40825 SUF8tP(UGG)H 72 nt15.96■□□□□ 0.15
ALA1P40825 tP(UGG)LtP(UGG)L 72 nt15.96■□□□□ 0.15
ALA1P40825 SUF7tP(UGG)M 72 nt15.96■□□□□ 0.15
ALA1P40825 tP(UGG)N1tP(UGG)N1 72 nt15.96■□□□□ 0.15
ALA1P40825 tP(UGG)N2tP(UGG)N2 72 nt15.96■□□□□ 0.15
ALA1P40825 tP(UGG)O1tP(UGG)O1 72 nt15.96■□□□□ 0.15
ALA1P40825 SUF11tP(UGG)O2 72 nt15.96■□□□□ 0.15
ALA1P40825 CCC1YLR220W 969 nt15.78■□□□□ 0.12
ALA1P40825 YOL085CYOL085C 342 nt15.71■□□□□ 0.11
ALA1P40825 RTC3YHR087W 336 nt15.67■□□□□ 0.1
ALA1P40825 RPP1BYDL130W 321 nt15.56■□□□□ 0.08
ALA1P40825 PKP1YIL042C 1185 nt15.54■□□□□ 0.08
ALA1P40825 RVS167YDR388W 1449 nt15.36■□□□□ 0.05
ALA1P40825 SCJ1YMR214W 1134 nt15.34■□□□□ 0.05
ALA1P40825 tP(UGG)O3tP(UGG)O3 72 nt14.99□□□□□ -0.01
ALA1P40825 PET122YER153C 765 nt14.95□□□□□ -0.02
ALA1P40825 PUT4YOR348C 1884 nt14.87□□□□□ -0.03
ALA1P40825 SHR5YOL110W 714 nt14.79□□□□□ -0.04
ALA1P40825 ATS1YAL020C 1002 nt14.67□□□□□ -0.06
ALA1P40825 SCR1SCR1 522 nt14.62□□□□□ -0.07
ALA1P40825 SSA3YBL075C 1950 nt14.62□□□□□ -0.07
ALA1P40825 URN1YPR152C 1398 nt14.59□□□□□ -0.07
ALA1P40825 ARE1YCR048W 1833 nt14.51□□□□□ -0.09
ALA1P40825 DEP1YAL013W 1218 nt14.51□□□□□ -0.09
ALA1P40825 RRN5YLR141W 1092 nt14.47□□□□□ -0.09
ALA1P40825 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
ALA1P40825 SAH1YER043C 1350 nt14.44□□□□□ -0.1
ALA1P40825 OPI9YLR338W 858 nt14.42□□□□□ -0.1
ALA1P40825 POA1YBR022W 534 nt14.36□□□□□ -0.11
ALA1P40825 YHR049C-AYHR049C-A 297 nt14.31□□□□□ -0.12
ALA1P40825 GAR1YHR089C 618 nt14.23□□□□□ -0.13
ALA1P40825 RPN10YHR200W 807 nt14.23□□□□□ -0.13
ALA1P40825 YNL208WYNL208W 600 nt14.2□□□□□ -0.14
ALA1P40825 YER088W-BYER088W-B 147 nt14.19□□□□□ -0.14
ALA1P40825 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
ALA1P40825 RSB1YOR049C 1065 nt14.05□□□□□ -0.16
ALA1P40825 Q0182Q0182 405 nt14□□□□□ -0.17
ALA1P40825 PUN1YLR414C 792 nt13.97□□□□□ -0.17
ALA1P40825 BUD23YCR047C 828 nt13.92□□□□□ -0.18
ALA1P40825 PTC2YER089C 1395 nt13.89□□□□□ -0.19
ALA1P40825 YJR018WYJR018W 363 nt13.87□□□□□ -0.19
ALA1P40825 TIR1YER011W 765 nt13.76□□□□□ -0.21
ALA1P40825 SPT5YML010W 3192 nt13.74□□□□□ -0.21
ALA1P40825 NAB2YGL122C 1578 nt13.73□□□□□ -0.21
ALA1P40825 MOT3YMR070W 1473 nt13.71□□□□□ -0.21
ALA1P40825 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
ALA1P40825 YJR120WYJR120W 351 nt13.69□□□□□ -0.22
ALA1P40825 FIS1YIL065C 468 nt13.58□□□□□ -0.24
ALA1P40825 PST2YDR032C 597 nt13.52□□□□□ -0.25
ALA1P40825 DAL1YIR027C 1383 nt13.5□□□□□ -0.25
ALA1P40825 SRB2YHR041C 633 nt13.48□□□□□ -0.25
ALA1P40825 RPP2BYDR382W 333 nt13.47□□□□□ -0.25
ALA1P40825 FPR4YLR449W 1179 nt13.46□□□□□ -0.25
ALA1P40825 PHO4YFR034C 939 nt13.4□□□□□ -0.26
ALA1P40825 INM2YDR287W 879 nt13.38□□□□□ -0.27
ALA1P40825 SSA4YER103W 1929 nt13.34□□□□□ -0.27
ALA1P40825 MEP2YNL142W 1500 nt13.27□□□□□ -0.29
ALA1P40825 YBL100CYBL100C 315 nt13.25□□□□□ -0.29
ALA1P40825 YPS1YLR120C 1710 nt13.25□□□□□ -0.29
ALA1P40825 BDH2YAL061W 1254 nt13.19□□□□□ -0.3
ALA1P40825 YKL097CYKL097C 411 nt13.15□□□□□ -0.3
ALA1P40825 YDR095CYDR095C 411 nt13.12□□□□□ -0.31
ALA1P40825 WWM1YFL010C 636 nt13.12□□□□□ -0.31
ALA1P40825 DCW1YKL046C 1350 nt13.1□□□□□ -0.31
ALA1P40825 YHR165W-AYHR165W-A 312 nt13.1□□□□□ -0.31
ALA1P40825 FUN26YAL022C 1554 nt13.08□□□□□ -0.32
ALA1P40825 SHU1YHL006C 453 nt13.05□□□□□ -0.32
ALA1P40825 YGR139WYGR139W 339 nt13.02□□□□□ -0.33
ALA1P40825 TRM9YML014W 840 nt12.96□□□□□ -0.33
ALA1P40825 YAL037C-BYAL037C-B 975 nt12.95□□□□□ -0.34
ALA1P40825 LSM3YLR438C-A 270 nt12.94□□□□□ -0.34
ALA1P40825 ALF1YNL148C 765 nt12.92□□□□□ -0.34
ALA1P40825 PTP1YDL230W 1008 nt12.89□□□□□ -0.35
ALA1P40825 YGR021WYGR021W 873 nt12.89□□□□□ -0.35
ALA1P40825 HOM6YJR139C 1080 nt12.89□□□□□ -0.35
ALA1P40825 EMI2YDR516C 1503 nt12.88□□□□□ -0.35
ALA1P40825 CCT6YDR188W 1641 nt12.88□□□□□ -0.35
ALA1P40825 YFL021C-AYFL021C-A 855 nt12.88□□□□□ -0.35
ALA1P40825 BDF1YLR399C 2061 nt12.87□□□□□ -0.35
ALA1P40825 RPP2AYOL039W 321 nt12.84□□□□□ -0.35
ALA1P40825 CAC2YML102W 1407 nt12.84□□□□□ -0.35
ALA1P40825 MNP1YGL068W 585 nt12.82□□□□□ -0.36
ALA1P40825 SIS1YNL007C 1059 nt12.78□□□□□ -0.36
ALA1P40825 YDL221WYDL221W 552 nt12.77□□□□□ -0.37
ALA1P40825 YBR220CYBR220C 1683 nt12.76□□□□□ -0.37
ALA1P40825 SUF2tP(AGG)C 72 nt12.75□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms