RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	ATG9	Q12142	997 aa		4.79	□□□□□ -1.64
XKS1	YGR194C	YVC1	Q12324	675 aa		4.79	□□□□□ -1.64
XKS1	YGR194C	TOP1	P04786	769 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	CDC60	P26637	1090 aa	Known RBP	4.78	□□□□□ -1.64
XKS1	YGR194C	SEC65	P29478	273 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	HUL4	P40985	892 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	SDH1	Q00711	640 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	VPS72	Q03388	795 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	SPR28	Q04921	423 aa		4.78	□□□□□ -1.64
XKS1	YGR194C	SSK22	P25390	1331 aa	Predicted RBP	4.77	□□□□□ -1.65
XKS1	YGR194C	PHO13	P19881	312 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	RET1	P22276	1149 aa	Known RBP	4.77	□□□□□ -1.65
XKS1	YGR194C	ADD66	P36040	267 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	HEL1	P36113	551 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	ALF1	P53904	254 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	VPS30	Q02948	557 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	HOT1	Q03213	719 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	RKM2	Q03942	479 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	YDR338C	Q05497	695 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	VAC14	Q06708	880 aa		4.77	□□□□□ -1.65
XKS1	YGR194C	ARD1	P07347	238 aa	Predicted RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	PGI1	P12709	554 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	HCA4	P20448	770 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	PEP3	P27801	918 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	ZUO1	P32527	433 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	NFU1	P32860	256 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	ADE17	P38009	592 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	MIC19	P43594	170 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	FYV8	P46949	817 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	VPS4	P52917	437 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	NNF2	P53253	936 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	GFD1	Q04839	188 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	STE23	Q06010	1027 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	PUS7	Q08647	676 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	AFT2	Q08957	416 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	ASF1	P32447	279 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	SEC8	P32855	1065 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	YJR079W	P47126	109 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	TAN1	P53072	289 aa	Predicted RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	YNR063W	P53749	607 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	RSA3	Q05942	220 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	YLR407W	Q06070	228 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	YLR257W	Q06146	321 aa	Known RBP	4.76	□□□□□ -1.65
XKS1	YGR194C	EST2	Q06163	884 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	LAP2	Q10740	671 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	SMC6	Q12749	1114 aa		4.76	□□□□□ -1.65
XKS1	YGR194C	CDC37	P06101	506 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	RAD3	P06839	778 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	MTF2	P10849	440 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
XKS1	YGR194C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
XKS1	YGR194C	DAL7	P21826	554 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	RAD53	P22216	821 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	SEC14	P24280	304 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	HSE1	P38753	452 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	PEX7	P39108	375 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	YMR124W	P39523	943 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	SEC26	P41810	973 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	SPO19	Q03029	223 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	TPP1	Q03796	238 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	EIS1	Q05050	843 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	HDA2	Q06629	674 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	RRP6	Q12149	733 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	NSI1	Q12457	570 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	YRF1-2	P40105	1681 aa		4.75	□□□□□ -1.65
XKS1	YGR194C	RRP5	Q05022	1729 aa	Known RBP	4.75	□□□□□ -1.65
XKS1	YGR194C	PRP16	P15938	1071 aa	Predicted RBP	4.74	□□□□□ -1.65
XKS1	YGR194C	SRB4	P32569	687 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	AFG2	P32794	780 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	YET1	P35723	206 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	ATG14	P38270	344 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	NMD3	P38861	518 aa	Known RBP	4.74	□□□□□ -1.65
XKS1	YGR194C	SMF1	P38925	575 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	TRS85	P46944	698 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	BOP3	P53958	396 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	TRE1	Q08919	783 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	EFM2	P38347	419 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	OSH3	P38713	996 aa	Known RBP	4.74	□□□□□ -1.65
XKS1	YGR194C	SIP3	P38717	1229 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	QNS1	P38795	714 aa	Known RBP	4.74	□□□□□ -1.65
XKS1	YGR194C	CTM1	P38818	585 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	RPN10	P38886	268 aa	Known RBP	4.74	□□□□□ -1.65
XKS1	YGR194C	BUD16	P39988	312 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	YJR142W	P47173	342 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	GNP1	P48813	663 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	VTC3	Q02725	835 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	PKH1	Q03407	766 aa		4.74	□□□□□ -1.65
XKS1	YGR194C	CDC8	P00572	216 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	OPI1	P21957	404 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	YME2	P32843	850 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	CNS1	P33313	385 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	YSW1	P38280	609 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	CCC2	P38995	1004 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	VPS8	P39702	1274 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	HMI1	Q12039	706 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	NUR1	Q12066	484 aa		4.73	□□□□□ -1.65
XKS1	YGR194C	PMR1	P13586	950 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	RAD51	P25454	400 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	APL2	P36000	726 aa	Predicted RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	PXL1	P36166	706 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms