RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeastyeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XKS1YGR194C MTC1P47018 478 aaKnown RBP11.81□□□□□ -0.52
XKS1YGR194C DRS1P32892 752 aaKnown RBP11.4□□□□□ -0.58
XKS1YGR194C FAP1P53971 965 aa10.15□□□□□ -0.78
XKS1YGR194C DIP2Q12220 943 aaPredicted RBP9.86□□□□□ -0.83
XKS1YGR194C PRI1P10363 409 aa9.75□□□□□ -0.85
XKS1YGR194C ISW2Q08773 1120 aa9.68□□□□□ -0.86
XKS1YGR194C BFR2Q06631 534 aaKnown RBP9.66□□□□□ -0.86
XKS1YGR194C AVT3P36062 692 aa9.65□□□□□ -0.86
XKS1YGR194C AAD16Q02895 342 aa9.62□□□□□ -0.87
XKS1YGR194C RPG1P38249 964 aaKnown RBP9.58□□□□□ -0.88
XKS1YGR194C PRY3P47033 881 aa9.52□□□□□ -0.89
XKS1YGR194C RSE1Q04693 1361 aaKnown RBP9.41□□□□□ -0.9
XKS1YGR194C TSR3Q12094 313 aaKnown RBP9.21□□□□□ -0.93
XKS1YGR194C RPL17AP05740 184 aaKnown RBP9.09□□□□□ -0.95
XKS1YGR194C RPL17BP46990 184 aaKnown RBP9.09□□□□□ -0.95
XKS1YGR194C YCK3P39962 524 aa9.07□□□□□ -0.96
XKS1YGR194C REB1P21538 810 aa9.01□□□□□ -0.97
XKS1YGR194C HAA1Q12753 694 aaKnown RBP8.97□□□□□ -0.97
XKS1YGR194C MRPL32P25348 183 aa8.84□□□□□ -0.99
XKS1YGR194C TFA1P36100 482 aa8.82□□□□□ -1
XKS1YGR194C SPT21P35209 758 aa8.77□□□□□ -1.01
XKS1YGR194C YKR023WP36119 530 aaKnown RBP8.58□□□□□ -1.04
XKS1YGR194C RIM101P33400 625 aa8.55□□□□□ -1.04
XKS1YGR194C CDC27P38042 758 aa8.5□□□□□ -1.05
XKS1YGR194C TFC8Q12308 588 aa8.4□□□□□ -1.07
XKS1YGR194C HOP09932 586 aa8.38□□□□□ -1.07
XKS1YGR194C YGL015CP33199 130 aa8.38□□□□□ -1.07
XKS1YGR194C DCD1P06773 312 aa8.33□□□□□ -1.08
XKS1YGR194C OXP1P28273 1286 aa8.27□□□□□ -1.09
XKS1YGR194C UBP10P53874 792 aaPredicted RBP8.2□□□□□ -1.1
XKS1YGR194C MAP2P38174 421 aaKnown RBP8.18□□□□□ -1.1
XKS1YGR194C BCH2P36122 765 aa8.14□□□□□ -1.11
XKS1YGR194C YIL055CP40523 627 aaKnown RBP8.11□□□□□ -1.11
XKS1YGR194C PTP3P40048 928 aa8.08□□□□□ -1.12
XKS1YGR194C SCY1P53009 804 aa8.08□□□□□ -1.12
XKS1YGR194C YAH1Q12184 172 aaKnown RBP8.04□□□□□ -1.12
XKS1YGR194C RSM7P47150 247 aa8.01□□□□□ -1.13
XKS1YGR194C YLR271WQ06152 274 aa7.96□□□□□ -1.13
XKS1YGR194C SLX5P32828 619 aaKnown RBP7.95□□□□□ -1.14
XKS1YGR194C SSP1P38871 571 aa7.95□□□□□ -1.14
XKS1YGR194C EPS1P40557 701 aa7.95□□□□□ -1.14
XKS1YGR194C BDF1P35817 686 aa7.92□□□□□ -1.14
XKS1YGR194C AI2P03876 854 aa7.9□□□□□ -1.14
XKS1YGR194C BBC1P47068 1157 aa7.87□□□□□ -1.15
XKS1YGR194C TIF4632P39936 914 aaKnown RBP7.84□□□□□ -1.15
XKS1YGR194C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
XKS1YGR194C TGL3P40308 642 aa7.82□□□□□ -1.16
XKS1YGR194C PSD2P53037 1138 aaKnown RBP7.8□□□□□ -1.16
XKS1YGR194C MGA2P40578 1113 aa7.72□□□□□ -1.17
XKS1YGR194C CST9Q06032 482 aa7.7□□□□□ -1.18
XKS1YGR194C MRM1P25270 412 aa7.64□□□□□ -1.19
XKS1YGR194C NSR1P27476 414 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
XKS1YGR194C MST1P07236 462 aa7.56□□□□□ -1.2
XKS1YGR194C YAP5P40574 245 aa7.53□□□□□ -1.2
XKS1YGR194C YOR238WQ08634 303 aa7.53□□□□□ -1.2
XKS1YGR194C BUD31P25337 157 aaPredicted RBP7.51□□□□□ -1.21
XKS1YGR194C RTG3P38165 486 aa7.5□□□□□ -1.21
XKS1YGR194C RCR1P38212 213 aa7.48□□□□□ -1.21
XKS1YGR194C VPS29P38759 282 aa7.48□□□□□ -1.21
XKS1YGR194C UBP9P39967 754 aa7.43□□□□□ -1.22
XKS1YGR194C YMR1P47147 688 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
XKS1YGR194C PIB1Q06651 286 aa7.4□□□□□ -1.23
XKS1YGR194C DBP1P24784 617 aaKnown RBP7.39□□□□□ -1.23
XKS1YGR194C STS1P38637 319 aa7.38□□□□□ -1.23
XKS1YGR194C RAM2P29703 316 aa7.36□□□□□ -1.23
XKS1YGR194C YFR006WP43590 535 aa7.36□□□□□ -1.23
XKS1YGR194C YBL029C-AQ3E756 94 aa7.34□□□□□ -1.23
XKS1YGR194C GTT3P39996 337 aa7.32□□□□□ -1.24
XKS1YGR194C VNX1P42839 908 aa7.3□□□□□ -1.24
XKS1YGR194C VMA1P17255 1071 aaKnown RBP7.29□□□□□ -1.24
XKS1YGR194C MAK11P20484 414 aaKnown RBP7.29□□□□□ -1.24
XKS1YGR194C WSC3Q12215 556 aa7.28□□□□□ -1.24
XKS1YGR194C SAM3Q08986 587 aa7.24□□□□□ -1.25
XKS1YGR194C SPP1Q03012 353 aa7.21□□□□□ -1.26
XKS1YGR194C YOL036WQ08206 761 aa7.2□□□□□ -1.26
XKS1YGR194C MSB4Q12317 492 aa7.2□□□□□ -1.26
XKS1YGR194C TIF11P38912 153 aaKnown RBP7.19□□□□□ -1.26
XKS1YGR194C EDS1P38073 919 aa7.18□□□□□ -1.26
XKS1YGR194C SET4P42948 560 aa7.18□□□□□ -1.26
XKS1YGR194C COQ8P27697 501 aa7.17□□□□□ -1.26
XKS1YGR194C MIF2P35201 549 aa7.17□□□□□ -1.26
XKS1YGR194C SIS1P25294 352 aaKnown RBP7.16□□□□□ -1.26
XKS1YGR194C ULI1P43604 169 aa7.13□□□□□ -1.27
XKS1YGR194C IOC2Q12072 812 aa7.13□□□□□ -1.27
XKS1YGR194C PTC3P34221 468 aaKnown RBP7.13□□□□□ -1.27
XKS1YGR194C EAP1P36041 632 aaKnown RBP7.13□□□□□ -1.27
XKS1YGR194C GYP5Q12344 894 aa7.13□□□□□ -1.27
XKS1YGR194C NOP53Q12080 455 aaKnown RBP7.1□□□□□ -1.27
XKS1YGR194C TRP5P00931 707 aaKnown RBP7.09□□□□□ -1.27
XKS1YGR194C ABP1P15891 592 aaKnown RBP7.09□□□□□ -1.27
XKS1YGR194C SET1P38827 1080 aaKnown RBP7.09□□□□□ -1.27
XKS1YGR194C GRE2Q12068 342 aaKnown RBP7.08□□□□□ -1.28
XKS1YGR194C DMA1P38823 416 aa7.08□□□□□ -1.28
XKS1YGR194C LDB19Q12502 818 aa7.08□□□□□ -1.28
XKS1YGR194C DCW1P36091 449 aa7.06□□□□□ -1.28
XKS1YGR194C GUT1P32190 709 aa7.05□□□□□ -1.28
XKS1YGR194C ATH1P48016 1211 aa7.05□□□□□ -1.28
XKS1YGR194C HTA1P04911 132 aaKnown RBP7.04□□□□□ -1.28
XKS1YGR194C HTA2P04912 132 aa7.04□□□□□ -1.28
XKS1YGR194C FKH1P40466 484 aa7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms