RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	NBP1	P52919	319 aa	Predicted RBP	6.63	□□□□□ -1.35
LDS1	YAL018C	ARK1	P53974	638 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	DAK1	P54838	584 aa	Known RBP	6.63	□□□□□ -1.35
LDS1	YAL018C	ULP1	Q02724	621 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	GIR2	Q03768	265 aa	Predicted RBP	6.63	□□□□□ -1.35
LDS1	YAL018C	YPR084W	Q06821	456 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	YDL057W	Q07379	328 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	TMA16	Q08687	178 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	PLP2	Q12017	286 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	RTP1	Q12751	981 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	YDR461C-A	Q2V2P7	80 aa		6.63	□□□□□ -1.35
LDS1	YAL018C	DED1	P06634	604 aa	Known RBP	6.62	□□□□□ -1.35
LDS1	YAL018C	MAS2	P11914	482 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	DAL7	P21826	554 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	MSH3	P25336	1018 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	APL1	P27351	700 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	NAM7	P30771	971 aa	Known RBP	6.62	□□□□□ -1.35
LDS1	YAL018C	SMY2	P32909	740 aa	Known RBP	6.62	□□□□□ -1.35
LDS1	YAL018C	BUD2	P33314	1104 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	YET1	P35723	206 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	PSY4	P38193	441 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	SPT8	P38915	602 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	NUP85	P46673	744 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	LSC2	P53312	427 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	RTT102	P53330	157 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	VPS75	P53853	264 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	RLP24	Q07915	199 aa	Known RBP	6.62	□□□□□ -1.35
LDS1	YAL018C	YAP7	Q08182	245 aa		6.62	□□□□□ -1.35
LDS1	YAL018C	MDM20	Q12387	796 aa	Known RBP	6.62	□□□□□ -1.35
LDS1	YAL018C	HEM1	P09950	548 aa	Predicted RBP	6.61	□□□□□ -1.35
LDS1	YAL018C	PHO13	P19881	312 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	SPO11	P23179	398 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	TRK2	P28584	889 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	MNN4	P36044	1178 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	FLR1	P38124	548 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	ACO2	P39533	789 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	ALD5	P40047	520 aa	Known RBP	6.61	□□□□□ -1.35
LDS1	YAL018C	AAD14	P42884	376 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	SMC3	P47037	1230 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	SCS3	P53012	380 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	BRE5	P53741	515 aa	Known RBP	6.61	□□□□□ -1.35
LDS1	YAL018C	DON1	Q05610	365 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	SPO75	Q07798	868 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	IES4	Q08561	116 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	ATG11	Q12527	1178 aa		6.61	□□□□□ -1.35
LDS1	YAL018C	SSB1	P11484	613 aa	Known RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
LDS1	YAL018C	MCM2	P29469	868 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	MSS51	P32335	436 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	SKG6	P32900	734 aa	Predicted RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	KTR2	P33550	425 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	YKL023W	P36103	277 aa	Known RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	MIP6	P38760	659 aa	Known RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	SSB2	P40150	613 aa	Known RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	ACF4	P47129	309 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	TAM41	P53230	385 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	VPS62	P53285	467 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	CAF120	P53836	1060 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	CUS1	Q02554	436 aa	Predicted RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	VTC3	Q02725	835 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	YLR287C	Q05881	355 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	ECM7	Q06200	448 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	YOL075C	Q08234	1294 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	YPL216W	Q08964	1102 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	CDC53	Q12018	815 aa	Known RBP	6.6	□□□□□ -1.35
LDS1	YAL018C	MYO1	P08964	1928 aa		6.6	□□□□□ -1.35
LDS1	YAL018C	CHS2	P14180	963 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	CYC8	P14922	966 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	TMT1	P32643	299 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	BCS1	P32839	456 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	GLY1	P37303	387 aa	Known RBP	6.59	□□□□□ -1.35
LDS1	YAL018C	LDH1	P38139	375 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	NPP2	P39997	493 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	AVT1	P47082	602 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	CUL3	P53202	744 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	YNL146W	P53906	100 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	MLH2	Q07980	695 aa		6.59	□□□□□ -1.35
LDS1	YAL018C	RPS6A	P0CX37	236 aa	Known RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	RPS6B	P0CX38	236 aa	Predicted RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	WHI2	P12611	486 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	NAT1	P12945	854 aa	Known RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	TEC1	P18412	486 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	SEC65	P29478	273 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	MUD1	P32605	298 aa	Known RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	DUR3	P33413	735 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	YEL1	P34225	687 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	PXL1	P36166	706 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	MRX3	P38172	270 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	SMC2	P38989	1170 aa	Known RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	UBP5	P39944	805 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	SDS3	P40505	327 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	LCB2	P40970	561 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
LDS1	YAL018C	TIM8	P57744	87 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	FMP30	Q02883	468 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	YCG1	Q06680	1035 aa		6.58	□□□□□ -1.36
LDS1	YAL018C	FAL1	Q12099	399 aa	Known RBP	6.58	□□□□□ -1.36
LDS1	YAL018C	UIP5	P36137	443 aa		6.57	□□□□□ -1.36
LDS1	YAL018C	MMS4	P38257	691 aa		6.57	□□□□□ -1.36
LDS1	YAL018C	ERC1	P38767	581 aa		6.57	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms