RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C MSC2Q03455 724 aa8.49□□□□□ -1.05
PUP3YER094C DON1Q05610 365 aa8.49□□□□□ -1.05
PUP3YER094C RLP24Q07915 199 aaKnown RBP8.49□□□□□ -1.05
PUP3YER094C HFI1Q12060 488 aa8.49□□□□□ -1.05
PUP3YER094C FAL1Q12099 399 aaKnown RBP8.49□□□□□ -1.05
PUP3YER094C YOL098CQ12496 1037 aa8.49□□□□□ -1.05
PUP3YER094C BCS1P32839 456 aa8.48□□□□□ -1.05
PUP3YER094C YKL023WP36103 277 aaKnown RBP8.48□□□□□ -1.05
PUP3YER094C IES1P43579 692 aa8.48□□□□□ -1.05
PUP3YER094C ERG5P54781 538 aa8.48□□□□□ -1.05
PUP3YER094C CTR9P89105 1077 aa8.48□□□□□ -1.05
PUP3YER094C YML020WQ03722 664 aa8.48□□□□□ -1.05
PUP3YER094C YLR297WQ05899 129 aa8.48□□□□□ -1.05
PUP3YER094C VPS38Q05919 439 aa8.48□□□□□ -1.05
PUP3YER094C CDC53Q12018 815 aaKnown RBP8.48□□□□□ -1.05
PUP3YER094C SUT2Q12286 268 aa8.48□□□□□ -1.05
PUP3YER094C MAM3Q12296 706 aa8.48□□□□□ -1.05
PUP3YER094C ATG11Q12527 1178 aa8.48□□□□□ -1.05
PUP3YER094C RTP1Q12751 981 aa8.48□□□□□ -1.05
PUP3YER094C MTF2P10849 440 aa8.47□□□□□ -1.05
PUP3YER094C SPO12P17123 173 aa8.47□□□□□ -1.05
PUP3YER094C AFT1P22149 690 aa8.47□□□□□ -1.05
PUP3YER094C DPH2P32461 534 aa8.47□□□□□ -1.05
PUP3YER094C PAH1P32567 862 aa8.47□□□□□ -1.05
PUP3YER094C SMC1P32908 1225 aa8.47□□□□□ -1.05
PUP3YER094C PCH2P38126 564 aa8.47□□□□□ -1.05
PUP3YER094C VID24P38263 362 aa8.47□□□□□ -1.05
PUP3YER094C SMC2P38989 1170 aaKnown RBP8.47□□□□□ -1.05
PUP3YER094C NPP2P39997 493 aa8.47□□□□□ -1.05
PUP3YER094C SHQ1P40486 507 aaPredicted RBP8.47□□□□□ -1.05
PUP3YER094C YAP5P40574 245 aa8.47□□□□□ -1.05
PUP3YER094C FIG4P42837 879 aa8.47□□□□□ -1.05
PUP3YER094C SCD6P45978 349 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
PUP3YER094C STU2P46675 888 aa8.47□□□□□ -1.05
PUP3YER094C HSH155P49955 971 aaKnown RBP8.47□□□□□ -1.05
PUP3YER094C SHE10P53075 577 aa8.47□□□□□ -1.05
PUP3YER094C UTP5Q04177 643 aaKnown RBP8.47□□□□□ -1.05
PUP3YER094C UTP14Q04500 899 aaKnown RBP8.47□□□□□ -1.05
PUP3YER094C PIN4P34217 668 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
PUP3YER094C PRY3P47033 881 aa8.46□□□□□ -1.06
PUP3YER094C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
PUP3YER094C JJJ3P47138 172 aa8.46□□□□□ -1.06
PUP3YER094C ASN1P49089 572 aaKnown RBP8.46□□□□□ -1.06
PUP3YER094C ORC5P50874 479 aa8.46□□□□□ -1.06
PUP3YER094C ULP1Q02724 621 aa8.46□□□□□ -1.06
PUP3YER094C VPS72Q03388 795 aa8.46□□□□□ -1.06
PUP3YER094C CEF1Q03654 590 aaPredicted RBP8.46□□□□□ -1.06
PUP3YER094C CSR1Q06705 408 aaKnown RBP8.46□□□□□ -1.06
PUP3YER094C OPY2Q06810 360 aa8.46□□□□□ -1.06
PUP3YER094C PPR1P07272 904 aaPredicted RBP8.45□□□□□ -1.06
PUP3YER094C WHI2P12611 486 aa8.45□□□□□ -1.06
PUP3YER094C PDC6P26263 563 aaKnown RBP8.45□□□□□ -1.06
PUP3YER094C MSS51P32335 436 aa8.45□□□□□ -1.06
PUP3YER094C JNM1P36224 373 aa8.45□□□□□ -1.06
PUP3YER094C CAJ1P39101 391 aa8.45□□□□□ -1.06
PUP3YER094C SDS3P40505 327 aa8.45□□□□□ -1.06
PUP3YER094C SAD1P43589 448 aa8.45□□□□□ -1.06
PUP3YER094C VPS62P53285 467 aa8.45□□□□□ -1.06
PUP3YER094C TRS130Q03660 1102 aa8.45□□□□□ -1.06
PUP3YER094C SHS1Q07657 551 aa8.45□□□□□ -1.06
PUP3YER094C NEW1Q08972 1196 aaKnown RBP8.45□□□□□ -1.06
PUP3YER094C SLX4Q12098 748 aa8.45□□□□□ -1.06
PUP3YER094C MDM20Q12387 796 aaKnown RBP8.45□□□□□ -1.06
PUP3YER094C TUP1P16649 713 aa8.44□□□□□ -1.06
PUP3YER094C PET123P17558 318 aa8.44□□□□□ -1.06
PUP3YER094C CBF2P32504 956 aa8.44□□□□□ -1.06
PUP3YER094C TMT1P32643 299 aa8.44□□□□□ -1.06
PUP3YER094C SKG6P32900 734 aaPredicted RBP8.44□□□□□ -1.06
PUP3YER094C KIC1P38692 1080 aa8.44□□□□□ -1.06
PUP3YER094C AFG3P39925 761 aa8.44□□□□□ -1.06
PUP3YER094C APT1P49435 187 aaKnown RBP8.44□□□□□ -1.06
PUP3YER094C MNP1P53163 194 aaPredicted RBP8.44□□□□□ -1.06
PUP3YER094C ENV11P53246 860 aa8.44□□□□□ -1.06
PUP3YER094C ALF1P53904 254 aa8.44□□□□□ -1.06
PUP3YER094C ECM7Q06200 448 aa8.44□□□□□ -1.06
PUP3YER094C TOM70P07213 617 aaKnown RBP8.43□□□□□ -1.06
PUP3YER094C DUR3P33413 735 aa8.43□□□□□ -1.06
PUP3YER094C STO1P34160 861 aaKnown RBP8.43□□□□□ -1.06
PUP3YER094C MMS4P38257 691 aa8.43□□□□□ -1.06
PUP3YER094C MMM1P41800 426 aa8.43□□□□□ -1.06
PUP3YER094C TAD1P53065 400 aa8.43□□□□□ -1.06
PUP3YER094C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
PUP3YER094C TBF1Q02457 562 aa8.43□□□□□ -1.06
PUP3YER094C YML082WQ04533 649 aaKnown RBP8.43□□□□□ -1.06
PUP3YER094C RGA2Q06407 1009 aa8.43□□□□□ -1.06
PUP3YER094C YDL206WQ12424 762 aa8.43□□□□□ -1.06
PUP3YER094C SEC23P15303 768 aaKnown RBP8.42□□□□□ -1.06
PUP3YER094C KIP1P28742 1111 aa8.42□□□□□ -1.06
PUP3YER094C SWI3P32591 825 aa8.42□□□□□ -1.06
PUP3YER094C RAD54P32863 898 aa8.42□□□□□ -1.06
PUP3YER094C FTR1P40088 404 aa8.42□□□□□ -1.06
PUP3YER094C SEC9P40357 651 aa8.42□□□□□ -1.06
PUP3YER094C ESBP6P53918 673 aa8.42□□□□□ -1.06
PUP3YER094C CUS1Q02554 436 aaPredicted RBP8.42□□□□□ -1.06
PUP3YER094C TSR1Q07381 788 aaKnown RBP8.42□□□□□ -1.06
PUP3YER094C ZPS1Q12512 249 aa8.42□□□□□ -1.06
PUP3YER094C NAT1P12945 854 aaKnown RBP8.41□□□□□ -1.06
PUP3YER094C LDH1P38139 375 aa8.41□□□□□ -1.06
PUP3YER094C MRX3P38172 270 aa8.41□□□□□ -1.06
PUP3YER094C MCX1P38323 520 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms