RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 ALD4P46367 519 aaKnown RBP-0.41□□□□□ -2.48
snR40snR40 SMX3P54999 86 aaPredicted RBP-0.41□□□□□ -2.48
snR40snR40 PMT7Q06644 662 aa-0.41□□□□□ -2.48
snR40snR40 APC11Q12157 165 aa-0.41□□□□□ -2.48
snR40snR40 YMR230W-AQ3E7B5 62 aa-0.41□□□□□ -2.48
snR40snR40 ENO1P00924 437 aaKnown RBP-0.42□□□□□ -2.48
snR40snR40 ACE2P21192 770 aa-0.42□□□□□ -2.48
snR40snR40 ATG14P38270 344 aa-0.42□□□□□ -2.48
snR40snR40 DHH1P39517 506 aaKnown RBP-0.42□□□□□ -2.48
snR40snR40 KTR7P40504 517 aa-0.42□□□□□ -2.48
snR40snR40 SSL2Q00578 843 aa-0.42□□□□□ -2.48
snR40snR40 MNT3P40549 630 aa-0.43□□□□□ -2.48
snR40snR40 YJL163CP46996 555 aa-0.43□□□□□ -2.48
snR40snR40 FMP30Q02883 468 aa-0.43□□□□□ -2.48
snR40snR40 RKM2Q03942 479 aa-0.43□□□□□ -2.48
snR40snR40 SRL1Q08673 210 aa-0.43□□□□□ -2.48
snR40snR40 CAF20P12962 161 aaKnown RBP-0.44□□□□□ -2.48
snR40snR40 SAP190P36123 1033 aa-0.44□□□□□ -2.48
snR40snR40 FMP46P36141 133 aaKnown RBP-0.44□□□□□ -2.48
snR40snR40 SHU2P38957 223 aa-0.44□□□□□ -2.48
snR40snR40 TAX4P47030 604 aa-0.44□□□□□ -2.48
snR40snR40 WHI4Q07655 649 aaKnown RBP-0.44□□□□□ -2.48
snR40snR40 SGO1Q08490 590 aa-0.44□□□□□ -2.48
snR40snR40 RPL42AP0CX27 106 aaKnown RBP-0.45□□□□□ -2.48
snR40snR40 RPL42BP0CX28 106 aaKnown RBP-0.45□□□□□ -2.48
snR40snR40 ATG19P35193 415 aa-0.45□□□□□ -2.48
snR40snR40 RTT107P38850 1070 aa-0.45□□□□□ -2.48
snR40snR40 YGR012WP53206 393 aa-0.45□□□□□ -2.48
snR40snR40 CRR1Q05790 422 aa-0.45□□□□□ -2.48
snR40snR40 CDA1Q06702 301 aa-0.45□□□□□ -2.48
snR40snR40 NRT1Q08485 598 aa-0.45□□□□□ -2.48
snR40snR40 RPB10P22139 70 aa-0.46□□□□□ -2.48
snR40snR40 MUP3P38734 546 aa-0.46□□□□□ -2.48
snR40snR40 BDH2P39713 417 aa-0.46□□□□□ -2.48
snR40snR40 HFM1P51979 1187 aa-0.46□□□□□ -2.48
snR40snR40 NUT1P53114 1132 aa-0.46□□□□□ -2.48
snR40snR40 UPC2Q12151 913 aa-0.46□□□□□ -2.48
snR40snR40 STE14P32584 239 aa-0.47□□□□□ -2.48
snR40snR40 AFG2P32794 780 aa-0.47□□□□□ -2.48
snR40snR40 CTF13P35203 478 aa-0.47□□□□□ -2.48
snR40snR40 YBR053CP38235 358 aa-0.47□□□□□ -2.48
snR40snR40 CCC2P38995 1004 aa-0.47□□□□□ -2.48
snR40snR40 OAF1P39720 1047 aaPredicted RBP-0.47□□□□□ -2.48
snR40snR40 MKT1P40850 830 aaKnown RBP-0.47□□□□□ -2.48
snR40snR40 DAK2P43550 591 aa-0.47□□□□□ -2.48
snR40snR40 PSP2P50109 593 aaKnown RBP-0.47□□□□□ -2.48
snR40snR40 MUP1P50276 574 aa-0.47□□□□□ -2.48
snR40snR40 UBC9P50623 157 aaPredicted RBP-0.47□□□□□ -2.48
snR40snR40 YML083CQ04526 418 aa-0.47□□□□□ -2.48
snR40snR40 GRS2Q06817 618 aa-0.47□□□□□ -2.48
snR40snR40 XYL2Q07993 356 aa-0.47□□□□□ -2.48
snR40snR40 YPL260WQ08977 551 aa-0.47□□□□□ -2.48
snR40snR40 SCP160P06105 1222 aaKnown RBP RIP-Chip data-0.48□□□□□ -2.49not detected
snR40snR40 VMA4P22203 233 aaKnown RBP-0.48□□□□□ -2.49
snR40snR40 LDB16P25587 256 aa-0.48□□□□□ -2.49
snR40snR40 HOT13P36078 116 aa-0.48□□□□□ -2.49
snR40snR40 UBS1P38290 277 aa-0.48□□□□□ -2.49
snR40snR40 NDC80P40460 691 aa-0.48□□□□□ -2.49
snR40snR40 RRT14P40470 206 aa-0.48□□□□□ -2.49
snR40snR40 TEL2P53038 688 aa-0.48□□□□□ -2.49
snR40snR40 NOG1Q02892 647 aaKnown RBP-0.48□□□□□ -2.49
snR40snR40 YMR317WQ04893 1140 aa-0.48□□□□□ -2.49
snR40snR40 UGA4P32837 571 aa-0.49□□□□□ -2.49
snR40snR40 ADD66P36040 267 aa-0.49□□□□□ -2.49
snR40snR40 JHD1P40034 492 aa-0.49□□□□□ -2.49
snR40snR40 YGR053CP53234 283 aa-0.49□□□□□ -2.49
snR40snR40 IMP4P53941 290 aaKnown RBP-0.49□□□□□ -2.49
snR40snR40 PTC5Q12511 572 aa-0.49□□□□□ -2.49
snR40snR40 RPA135P22138 1203 aaKnown RBP-0.5□□□□□ -2.49
snR40snR40 ATO2P32907 282 aa-0.5□□□□□ -2.49
snR40snR40 HES1P35843 434 aa-0.5□□□□□ -2.49
snR40snR40 GLG1P36143 616 aa-0.5□□□□□ -2.49
snR40snR40 FLO5P38894 1075 aa-0.5□□□□□ -2.49
snR40snR40 ORM2Q06144 216 aa-0.5□□□□□ -2.49
snR40snR40 PEX19Q07418 342 aa-0.5□□□□□ -2.49
snR40snR40 IRC13Q08630 104 aa-0.5□□□□□ -2.49
snR40snR40 FLP1P03870 423 aa-0.51□□□□□ -2.49
snR40snR40 ADE5,7P07244 802 aaKnown RBP-0.51□□□□□ -2.49
snR40snR40 MSH3P25336 1018 aa-0.51□□□□□ -2.49
snR40snR40 BEM3P32873 1128 aa-0.51□□□□□ -2.49
snR40snR40 SRP101P32916 621 aa-0.51□□□□□ -2.49
snR40snR40 MTC6P38849 526 aa-0.51□□□□□ -2.49
snR40snR40 RVS167P39743 482 aaKnown RBP-0.51□□□□□ -2.49
snR40snR40 TIF4631P39935 952 aaKnown RBP-0.51□□□□□ -2.49
snR40snR40 ERG13P54839 491 aaKnown RBP-0.51□□□□□ -2.49
snR40snR40 RSC4Q02206 625 aa-0.51□□□□□ -2.49
snR40snR40 FRE7Q12333 620 aa-0.51□□□□□ -2.49
snR40snR40 YPR089WO13585 888 aa-0.52□□□□□ -2.49
snR40snR40 HSF1P10961 833 aa-0.52□□□□□ -2.49
snR40snR40 SED4P25365 1065 aa-0.52□□□□□ -2.49
snR40snR40 SPC29P33419 253 aa-0.52□□□□□ -2.49
snR40snR40 FMP52P40008 231 aa-0.52□□□□□ -2.49
snR40snR40 SNA4Q07549 140 aa-0.52□□□□□ -2.49
snR40snR40 TRM11Q12463 433 aa-0.52□□□□□ -2.49
snR40snR40 BEM2P39960 2167 aaKnown RBP-0.53□□□□□ -2.49
snR40snR40 BI4P03879 638 aa-0.53□□□□□ -2.49
snR40snR40 TSR4P25040 408 aa-0.53□□□□□ -2.49
snR40snR40 SEC21P32074 935 aaKnown RBP-0.53□□□□□ -2.49
snR40snR40 MGM1P32266 881 aa-0.53□□□□□ -2.49
snR40snR40 ALG3P38179 458 aa-0.53□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms