Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 NSR1YGR159C 1245 nt15.07■□□□□ 0
RPL42BP0CX28 YML009W-BYML009W-B 477 nt14.8□□□□□ -0.04
RPL42BP0CX28 NOP1YDL014W 984 nt14.31□□□□□ -0.12
RPL42BP0CX28 MDJ1YFL016C 1536 nt13.64□□□□□ -0.23
RPL42BP0CX28 YKL036CYKL036C 393 nt12.81□□□□□ -0.36
RPL42BP0CX28 YJL027CYJL027C 417 nt12.63□□□□□ -0.39
RPL42BP0CX28 SRX1YKL086W 384 nt12.45□□□□□ -0.42
RPL42BP0CX28 Q0297Q0297 156 nt12.35□□□□□ -0.43
RPL42BP0CX28 DBP2YNL112W 1641 nt11.89□□□□□ -0.51
RPL42BP0CX28 YBR190WYBR190W 312 nt11.8□□□□□ -0.52
RPL42BP0CX28 YCR051WYCR051W 669 nt11.78□□□□□ -0.52
RPL42BP0CX28 RTC3YHR087W 336 nt11.51□□□□□ -0.57
RPL42BP0CX28 TRN1tP(UGG)A 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 SUF9tP(UGG)F 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 SUF8tP(UGG)H 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 tP(UGG)LtP(UGG)L 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 SUF7tP(UGG)M 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 tP(UGG)N1tP(UGG)N1 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 tP(UGG)N2tP(UGG)N2 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 tP(UGG)O1tP(UGG)O1 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 SUF11tP(UGG)O2 72 nt11.45□□□□□ -0.58
RPL42BP0CX28 SCS3YGL126W 1143 nt11.42□□□□□ -0.58
RPL42BP0CX28 SSA3YBL075C 1950 nt11.32□□□□□ -0.6
RPL42BP0CX28 CCC1YLR220W 969 nt11.32□□□□□ -0.6
RPL42BP0CX28 RVS167YDR388W 1449 nt11.24□□□□□ -0.61
RPL42BP0CX28 RPP1BYDL130W 321 nt11.08□□□□□ -0.64
RPL42BP0CX28 YOL085CYOL085C 342 nt11.07□□□□□ -0.64
RPL42BP0CX28 SCJ1YMR214W 1134 nt10.96□□□□□ -0.65
RPL42BP0CX28 PUT4YOR348C 1884 nt10.92□□□□□ -0.66
RPL42BP0CX28 PKP1YIL042C 1185 nt10.91□□□□□ -0.66
RPL42BP0CX28 tP(UGG)O3tP(UGG)O3 72 nt10.71□□□□□ -0.69
RPL42BP0CX28 SHR5YOL110W 714 nt10.71□□□□□ -0.69
RPL42BP0CX28 URN1YPR152C 1398 nt10.62□□□□□ -0.71
RPL42BP0CX28 ARE1YCR048W 1833 nt10.61□□□□□ -0.71
RPL42BP0CX28 PET122YER153C 765 nt10.59□□□□□ -0.71
RPL42BP0CX28 OPI9YLR338W 858 nt10.56□□□□□ -0.72
RPL42BP0CX28 POA1YBR022W 534 nt10.56□□□□□ -0.72
RPL42BP0CX28 SAH1YER043C 1350 nt10.54□□□□□ -0.72
RPL42BP0CX28 YHR049C-AYHR049C-A 297 nt10.51□□□□□ -0.73
RPL42BP0CX28 RPN10YHR200W 807 nt10.47□□□□□ -0.73
RPL42BP0CX28 DEP1YAL013W 1218 nt10.47□□□□□ -0.73
RPL42BP0CX28 SCR1SCR1 522 nt10.47□□□□□ -0.73
RPL42BP0CX28 YDJ1YNL064C 1230 nt10.41□□□□□ -0.74
RPL42BP0CX28 BSC6YOL137W 1494 nt10.41□□□□□ -0.74
RPL42BP0CX28 YNL208WYNL208W 600 nt10.33□□□□□ -0.76
RPL42BP0CX28 PUN1YLR414C 792 nt10.29□□□□□ -0.76
RPL42BP0CX28 RRN5YLR141W 1092 nt10.26□□□□□ -0.77
RPL42BP0CX28 BUD23YCR047C 828 nt10.25□□□□□ -0.77
RPL42BP0CX28 Q0182Q0182 405 nt10.25□□□□□ -0.77
RPL42BP0CX28 GAR1YHR089C 618 nt10.19□□□□□ -0.78
RPL42BP0CX28 PTC2YER089C 1395 nt10.16□□□□□ -0.78
RPL42BP0CX28 YJR018WYJR018W 363 nt10.13□□□□□ -0.79
RPL42BP0CX28 NAB2YGL122C 1578 nt10.11□□□□□ -0.79
RPL42BP0CX28 ATS1YAL020C 1002 nt10.11□□□□□ -0.79
RPL42BP0CX28 SPT5YML010W 3192 nt10.1□□□□□ -0.79
RPL42BP0CX28 YER088W-BYER088W-B 147 nt10.04□□□□□ -0.8
RPL42BP0CX28 MOT3YMR070W 1473 nt10.01□□□□□ -0.81
RPL42BP0CX28 SSA4YER103W 1929 nt9.98□□□□□ -0.81
RPL42BP0CX28 RSB1YOR049C 1065 nt9.96□□□□□ -0.82
RPL42BP0CX28 DAL1YIR027C 1383 nt9.9□□□□□ -0.82
RPL42BP0CX28 RPP2BYDR382W 333 nt9.88□□□□□ -0.83
RPL42BP0CX28 TIR1YER011W 765 nt9.88□□□□□ -0.83
RPL42BP0CX28 FIS1YIL065C 468 nt9.88□□□□□ -0.83
RPL42BP0CX28 FPR4YLR449W 1179 nt9.86□□□□□ -0.83
RPL42BP0CX28 INM2YDR287W 879 nt9.85□□□□□ -0.83
RPL42BP0CX28 MEP2YNL142W 1500 nt9.82□□□□□ -0.84
RPL42BP0CX28 PHO4YFR034C 939 nt9.79□□□□□ -0.84
RPL42BP0CX28 YJR120WYJR120W 351 nt9.79□□□□□ -0.84
RPL42BP0CX28 SSA1YAL005C 1929 nt9.78□□□□□ -0.84
RPL42BP0CX28 YPS1YLR120C 1710 nt9.73□□□□□ -0.85
RPL42BP0CX28 YHR165W-AYHR165W-A 312 nt9.67□□□□□ -0.86
RPL42BP0CX28 YBL100CYBL100C 315 nt9.66□□□□□ -0.86
RPL42BP0CX28 YDR095CYDR095C 411 nt9.62□□□□□ -0.87
RPL42BP0CX28 DCW1YKL046C 1350 nt9.61□□□□□ -0.87
RPL42BP0CX28 BDF1YLR399C 2061 nt9.59□□□□□ -0.87
RPL42BP0CX28 YMR090WYMR090W 684 nt9.59□□□□□ -0.87
RPL42BP0CX28 BDH2YAL061W 1254 nt9.57□□□□□ -0.88
RPL42BP0CX28 PAC11YDR488C 1602 nt9.53□□□□□ -0.88
RPL42BP0CX28 EMI2YDR516C 1503 nt9.52□□□□□ -0.88
RPL42BP0CX28 FUN26YAL022C 1554 nt9.52□□□□□ -0.89
RPL42BP0CX28 ALF1YNL148C 765 nt9.52□□□□□ -0.89
RPL42BP0CX28 TAT1YBR069C 1860 nt9.49□□□□□ -0.89
RPL42BP0CX28 TRM9YML014W 840 nt9.48□□□□□ -0.89
RPL42BP0CX28 SRB2YHR041C 633 nt9.47□□□□□ -0.89
RPL42BP0CX28 RPP2AYOL039W 321 nt9.45□□□□□ -0.9
RPL42BP0CX28 YBR220CYBR220C 1683 nt9.45□□□□□ -0.9
RPL42BP0CX28 YDL221WYDL221W 552 nt9.43□□□□□ -0.9
RPL42BP0CX28 PST2YDR032C 597 nt9.42□□□□□ -0.9
RPL42BP0CX28 YJL225CYJL225C 5277 nt9.42□□□□□ -0.9
RPL42BP0CX28 NVJ2YPR091C 2313 nt9.4□□□□□ -0.9
RPL42BP0CX28 LSM3YLR438C-A 270 nt9.4□□□□□ -0.9
RPL42BP0CX28 PTP1YDL230W 1008 nt9.38□□□□□ -0.91
RPL42BP0CX28 SUF2tP(AGG)C 72 nt9.38□□□□□ -0.91
RPL42BP0CX28 SUF10tP(AGG)N 72 nt9.38□□□□□ -0.91
RPL42BP0CX28 SDH1YKL148C 1923 nt9.38□□□□□ -0.91
RPL42BP0CX28 CCT6YDR188W 1641 nt9.37□□□□□ -0.91
RPL42BP0CX28 CAC2YML102W 1407 nt9.36□□□□□ -0.91
RPL42BP0CX28 WWM1YFL010C 636 nt9.35□□□□□ -0.91
RPL42BP0CX28 SIS1YNL007C 1059 nt9.33□□□□□ -0.92
RPL42BP0CX28 SCC4YER147C 1875 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms