RNA–Protein interactions for RNA: snR31

snR31, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR31, Length 225 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR31snR31 ZPR1P53303 486 aaKnown RBP9.28□□□□□ -0.92
snR31snR31 PEX29Q03370 554 aa9.28□□□□□ -0.92
snR31snR31 VPS38Q05919 439 aa9.28□□□□□ -0.92
snR31snR31 UBX5Q06682 500 aa9.28□□□□□ -0.92
snR31snR31 TYW1Q08960 810 aaKnown RBP9.28□□□□□ -0.92
snR31snR31 MED1Q12321 566 aa9.28□□□□□ -0.92
snR31snR31 SUV3P32580 737 aa9.27□□□□□ -0.93
snR31snR31 MCR1P36060 302 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 SMC2P38989 1170 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 RPN3P40016 523 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 OSW7P43611 510 aa9.27□□□□□ -0.93
snR31snR31 COS5P47187 383 aa9.27□□□□□ -0.93
snR31snR31 ALF1P53904 254 aa9.27□□□□□ -0.93
snR31snR31 VPS60Q03390 229 aa9.27□□□□□ -0.93
snR31snR31 UTP5Q04177 643 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 TMA64Q04600 565 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 SPO75Q07798 868 aa9.27□□□□□ -0.93
snR31snR31 ATG9Q12142 997 aa9.27□□□□□ -0.93
snR31snR31 RRP6Q12149 733 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 NOP58Q12499 511 aaKnown RBP9.27□□□□□ -0.93
snR31snR31 FKS1P38631 1876 aaKnown RBP9.26□□□□□ -0.93
snR31snR31 SWI6P09959 803 aa9.26□□□□□ -0.93
snR31snR31 RPS6AP0CX37 236 aaKnown RBP9.26□□□□□ -0.93
snR31snR31 RPS6BP0CX38 236 aaPredicted RBP9.26□□□□□ -0.93
snR31snR31 PCK1P10963 549 aa9.26□□□□□ -0.93
snR31snR31 CDC60P26637 1090 aaKnown RBP9.26□□□□□ -0.93
snR31snR31 APL1P27351 700 aa9.26□□□□□ -0.93
snR31snR31 SEC8P32855 1065 aa9.26□□□□□ -0.93
snR31snR31 VPS35P34110 944 aa9.26□□□□□ -0.93
snR31snR31 UBP13P38187 747 aa9.26□□□□□ -0.93
snR31snR31 YAP5P40574 245 aa9.26□□□□□ -0.93
snR31snR31 GPD2P41911 440 aaKnown RBP9.26□□□□□ -0.93
snR31snR31 TOS3P43637 560 aa9.26□□□□□ -0.93
snR31snR31 PTA1Q01329 785 aaPredicted RBP9.26□□□□□ -0.93
snR31snR31 HOS3Q02959 697 aaKnown RBP9.26□□□□□ -0.93
snR31snR31 GIR2Q03768 265 aaPredicted RBP9.26□□□□□ -0.93
snR31snR31 OPY2Q06810 360 aa9.26□□□□□ -0.93
snR31snR31 ISA1Q07821 250 aaPredicted RBP9.26□□□□□ -0.93
snR31snR31 HMI1Q12039 706 aa9.26□□□□□ -0.93
snR31snR31 PHR1P05066 565 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
snR31snR31 SSB1P11484 613 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 SUP45P12385 437 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 TCP1P12612 559 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 YDJ1P25491 409 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 ATG19P35193 415 aa9.25□□□□□ -0.93
snR31snR31 PNT1P38969 423 aa9.25□□□□□ -0.93
snR31snR31 HMF1P40037 129 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 SSB2P40150 613 aaKnown RBP9.25□□□□□ -0.93
snR31snR31 STR2P47164 639 aa9.25□□□□□ -0.93
snR31snR31 CCM1P48237 864 aaPredicted RBP9.25□□□□□ -0.93
snR31snR31 YGR125WP53273 1036 aa9.25□□□□□ -0.93
snR31snR31 CRD1Q07560 283 aa9.25□□□□□ -0.93
snR31snR31 YOL075CQ08234 1294 aa9.25□□□□□ -0.93
snR31snR31 TCO89Q08921 799 aa9.25□□□□□ -0.93
snR31snR31 YPL216WQ08964 1102 aa9.25□□□□□ -0.93
snR31snR31 YPL277CQ08989 487 aa9.25□□□□□ -0.93
snR31snR31 APL4Q12028 832 aa9.25□□□□□ -0.93
snR31snR31 CFT2Q12102 859 aaPredicted RBP9.25□□□□□ -0.93
snR31snR31 ESS1P22696 170 aa9.24□□□□□ -0.93
snR31snR31 PKC1P24583 1151 aa9.24□□□□□ -0.93
snR31snR31 UTR4P32626 227 aa9.24□□□□□ -0.93
snR31snR31 PCS60P38137 543 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
snR31snR31 BSD2P38356 321 aa9.24□□□□□ -0.93
snR31snR31 RTT107P38850 1070 aa9.24□□□□□ -0.93
snR31snR31 VFA1P40080 203 aa9.24□□□□□ -0.93
snR31snR31 YIL089WP40500 205 aa9.24□□□□□ -0.93
snR31snR31 FIS1P40515 155 aa9.24□□□□□ -0.93
snR31snR31 HUL4P40985 892 aa9.24□□□□□ -0.93
snR31snR31 APT1P49435 187 aaKnown RBP9.24□□□□□ -0.93
snR31snR31 NCS2P53923 493 aaPredicted RBP9.24□□□□□ -0.93
snR31snR31 CUR1Q06469 252 aa9.24□□□□□ -0.93
snR31snR31 WHI4Q07655 649 aaKnown RBP9.24□□□□□ -0.93
snR31snR31 DBP5P20449 482 aaKnown RBP9.23□□□□□ -0.93
snR31snR31 PRP22P24384 1145 aaKnown RBP9.23□□□□□ -0.93
snR31snR31 RRP43P25359 394 aaPredicted RBP9.23□□□□□ -0.93
snR31snR31 RPC25P35718 212 aa9.23□□□□□ -0.93
snR31snR31 PXL1P36166 706 aa9.23□□□□□ -0.93
snR31snR31 BIM1P40013 344 aa9.23□□□□□ -0.93
snR31snR31 DIP5P53388 608 aa9.23□□□□□ -0.93
snR31snR31 TOF1P53840 1238 aa9.23□□□□□ -0.93
snR31snR31 ERG5P54781 538 aa9.23□□□□□ -0.93
snR31snR31 DUS3Q06053 668 aaKnown RBP9.23□□□□□ -0.93
snR31snR31 YLR326WQ06170 240 aaKnown RBP9.23□□□□□ -0.93
snR31snR31 SMC5Q08204 1093 aa9.23□□□□□ -0.93
snR31snR31 NEW1Q08972 1196 aaKnown RBP9.23□□□□□ -0.93
snR31snR31 PET111P08468 800 aa9.22□□□□□ -0.93
snR31snR31 PHO8P11491 566 aa9.22□□□□□ -0.93
snR31snR31 PET123P17558 318 aa9.22□□□□□ -0.93
snR31snR31 EUG1P32474 517 aa9.22□□□□□ -0.93
snR31snR31 SHM1P37292 490 aaPredicted RBP9.22□□□□□ -0.93
snR31snR31 CEP3P40969 608 aa9.22□□□□□ -0.93
snR31snR31 BRE2P43132 505 aa9.22□□□□□ -0.93
snR31snR31 UBP15P50101 1230 aa9.22□□□□□ -0.93
snR31snR31 NBP1P52919 319 aaPredicted RBP9.22□□□□□ -0.93
snR31snR31 YPR078CQ06813 372 aa9.22□□□□□ -0.93
snR31snR31 YOL098CQ12496 1037 aa9.22□□□□□ -0.93
snR31snR31 MTF2P10849 440 aa9.21□□□□□ -0.94
snR31snR31 SEC23P15303 768 aaKnown RBP9.21□□□□□ -0.94
snR31snR31 CDC48P25694 835 aaKnown RBP9.21□□□□□ -0.94
snR31snR31 SRB4P32569 687 aa9.21□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms