RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MUD2P36084 527 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C REI1P38344 393 aaPredicted RBP6.66□□□□□ -1.34
VPS4YPR173C CCT4P39078 528 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C CTK3P46963 296 aaPredicted RBP6.66□□□□□ -1.34
VPS4YPR173C CAF130P53280 1122 aaPredicted RBP6.66□□□□□ -1.34
VPS4YPR173C RRB1Q04225 511 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C HCR1Q05775 265 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C VPS38Q05919 439 aa6.66□□□□□ -1.34
VPS4YPR173C TMA16Q08687 178 aa6.66□□□□□ -1.34
VPS4YPR173C RPP2BP02400 110 aaKnown RBP6.65□□□□□ -1.35
VPS4YPR173C STE6P12866 1290 aa6.65□□□□□ -1.35
VPS4YPR173C RGP1P16664 663 aa6.65□□□□□ -1.35
VPS4YPR173C RPO26P20435 155 aa6.65□□□□□ -1.35
VPS4YPR173C CDC3P32457 520 aaKnown RBP6.65□□□□□ -1.35
VPS4YPR173C APL2P36000 726 aaPredicted RBP6.65□□□□□ -1.35
VPS4YPR173C ADE17P38009 592 aaKnown RBP6.65□□□□□ -1.35
VPS4YPR173C GDT1P38301 280 aaPredicted RBP6.65□□□□□ -1.35
VPS4YPR173C SLX8P40072 274 aa6.65□□□□□ -1.35
VPS4YPR173C YBP2P53169 641 aa6.65□□□□□ -1.35
VPS4YPR173C PKH1Q03407 766 aa6.65□□□□□ -1.35
VPS4YPR173C SNU66Q12420 587 aaPredicted RBP6.65□□□□□ -1.35
VPS4YPR173C PFK2P16862 959 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
VPS4YPR173C AFT1P22149 690 aa6.64□□□□□ -1.35
VPS4YPR173C STO1P34160 861 aaKnown RBP6.64□□□□□ -1.35
VPS4YPR173C MET1P36150 593 aa6.64□□□□□ -1.35
VPS4YPR173C CRG1P38892 291 aaRIP-Chip data6.64□□□□□ -1.35not detected
VPS4YPR173C AIR1P40507 360 aaKnown RBP6.64□□□□□ -1.35
VPS4YPR173C EPL1P43572 832 aa6.64□□□□□ -1.35
VPS4YPR173C ROM1P53046 1155 aa6.64□□□□□ -1.35
VPS4YPR173C ADE16P54113 591 aaKnown RBP6.64□□□□□ -1.35
VPS4YPR173C GFD1Q04839 188 aaKnown RBP6.64□□□□□ -1.35
VPS4YPR173C DFG5Q05031 458 aa6.64□□□□□ -1.35
VPS4YPR173C RPN7Q06103 429 aaKnown RBP6.64□□□□□ -1.35
VPS4YPR173C LAM4P38800 1345 aa6.64□□□□□ -1.35
VPS4YPR173C RSF2P46974 1380 aa6.64□□□□□ -1.35
VPS4YPR173C DAT1P13483 248 aaKnown RBP6.63□□□□□ -1.35
VPS4YPR173C MSH3P25336 1018 aa6.63□□□□□ -1.35
VPS4YPR173C UTR2P32623 467 aa6.63□□□□□ -1.35
VPS4YPR173C SLD2P34252 453 aa6.63□□□□□ -1.35
VPS4YPR173C EFM2P38347 419 aa6.63□□□□□ -1.35
VPS4YPR173C CCC2P38995 1004 aa6.63□□□□□ -1.35
VPS4YPR173C THI12P42883 340 aa6.63□□□□□ -1.35
VPS4YPR173C THI5P43534 340 aa6.63□□□□□ -1.35
VPS4YPR173C THI11P47183 340 aa6.63□□□□□ -1.35
VPS4YPR173C CUE3P53137 624 aaKnown RBP6.63□□□□□ -1.35
VPS4YPR173C ALD3P54114 506 aa6.63□□□□□ -1.35
VPS4YPR173C ATG13Q06628 738 aa6.63□□□□□ -1.35
VPS4YPR173C OMS1Q06668 471 aa6.63□□□□□ -1.35
VPS4YPR173C THI13Q07748 340 aa6.63□□□□□ -1.35
VPS4YPR173C TAH18Q12181 623 aa6.63□□□□□ -1.35
VPS4YPR173C SEC23P15303 768 aaKnown RBP6.62□□□□□ -1.35
VPS4YPR173C RRP43P25359 394 aaPredicted RBP6.62□□□□□ -1.35
VPS4YPR173C NFU1P32860 256 aa6.62□□□□□ -1.35
VPS4YPR173C BYE1P36106 594 aa6.62□□□□□ -1.35
VPS4YPR173C RPN10P38886 268 aaKnown RBP6.62□□□□□ -1.35
VPS4YPR173C BUD16P39988 312 aa6.62□□□□□ -1.35
VPS4YPR173C NUG1P40010 520 aaKnown RBP6.62□□□□□ -1.35
VPS4YPR173C HST3P53687 447 aa6.62□□□□□ -1.35
VPS4YPR173C YNL193WP53870 558 aa6.62□□□□□ -1.35
VPS4YPR173C BOP3P53958 396 aa6.62□□□□□ -1.35
VPS4YPR173C EST2Q06163 884 aa6.62□□□□□ -1.35
VPS4YPR173C SPN1Q06505 410 aaPredicted RBP6.62□□□□□ -1.35
VPS4YPR173C BDS1Q08347 646 aa6.62□□□□□ -1.35
VPS4YPR173C DCS2Q12123 353 aa6.62□□□□□ -1.35
VPS4YPR173C ATG9Q12142 997 aa6.62□□□□□ -1.35
VPS4YPR173C UTP10P42945 1769 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C BMH1P29311 267 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C SAC6P32599 642 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C BMH2P34730 273 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C TBS1P38114 1094 aa6.61□□□□□ -1.35
VPS4YPR173C RGD1P38339 666 aa6.61□□□□□ -1.35
VPS4YPR173C SEC9P40357 651 aa6.61□□□□□ -1.35
VPS4YPR173C FYV8P46949 817 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C ENP2P48234 707 aaKnown RBP6.61□□□□□ -1.35
VPS4YPR173C VTC3Q02725 835 aa6.61□□□□□ -1.35
VPS4YPR173C UBP16Q02863 499 aa6.61□□□□□ -1.35
VPS4YPR173C FCP1Q03254 732 aa6.61□□□□□ -1.35
VPS4YPR173C ATG23Q06671 453 aa6.61□□□□□ -1.35
VPS4YPR173C VAC14Q06708 880 aa6.61□□□□□ -1.35
VPS4YPR173C PHM7Q12252 991 aa6.61□□□□□ -1.35
VPS4YPR173C OSH2Q12451 1283 aa6.61□□□□□ -1.35
VPS4YPR173C SAC3P46674 1301 aa6.6□□□□□ -1.35
VPS4YPR173C PIF1P07271 859 aa6.6□□□□□ -1.35
VPS4YPR173C MCM3P24279 971 aaKnown RBP6.6□□□□□ -1.35
VPS4YPR173C URA1P28272 314 aaPredicted RBP6.6□□□□□ -1.35
VPS4YPR173C ASH1P34233 588 aa6.6□□□□□ -1.35
VPS4YPR173C RER2P35196 286 aa6.6□□□□□ -1.35
VPS4YPR173C MCX1P38323 520 aaPredicted RBP6.6□□□□□ -1.35
VPS4YPR173C VPS8P39702 1274 aa6.6□□□□□ -1.35
VPS4YPR173C YMR147WP40218 223 aaKnown RBP6.6□□□□□ -1.35
VPS4YPR173C HUL4P40985 892 aa6.6□□□□□ -1.35
VPS4YPR173C AFT2Q08957 416 aa6.6□□□□□ -1.35
VPS4YPR173C RUD3Q12234 484 aaKnown RBP6.6□□□□□ -1.35
VPS4YPR173C YOL098CQ12496 1037 aa6.6□□□□□ -1.35
VPS4YPR173C RPS6AP0CX37 236 aaKnown RBP6.59□□□□□ -1.35
VPS4YPR173C RPS6BP0CX38 236 aaPredicted RBP6.59□□□□□ -1.35
VPS4YPR173C HCA4P20448 770 aaKnown RBP6.59□□□□□ -1.35
VPS4YPR173C VAN1P23642 535 aa6.59□□□□□ -1.35
VPS4YPR173C SEC65P29478 273 aa6.59□□□□□ -1.35
VPS4YPR173C ASF1P32447 279 aa6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms