RNA–Protein interactions for RNA: YBR038W

CHS2, Transcript of Chitin synthase II, yeast

Gene CHS2, Length 2,892 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS2	YBR038W	DPH6	Q12429	685 aa		3.42	□□□□□ -1.86
CHS2	YBR038W	ARD1	P07347	238 aa	Predicted RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	CKA2	P19454	339 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	VPS1	P21576	704 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	MSH3	P25336	1018 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	SAC6	P32599	642 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	SHM1	P37292	490 aa	Predicted RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	ICP55	P40051	511 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	SEC9	P40357	651 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	MAD1	P40957	749 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	HFM1	P51979	1187 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	ATF2	P53296	535 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	RET3	P53600	189 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	EBS1	Q03466	884 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	SYF1	Q04048	859 aa	Predicted RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	UBX2	Q04228	584 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	STE23	Q06010	1027 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	CSC1	Q06538	782 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	AFT2	Q08957	416 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	CDC37	P06101	506 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	CDC10	P25342	322 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	CLB5	P30283	435 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	GCG1	P32656	232 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	SER1	P33330	395 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	BOI1	P38041	980 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	YSW1	P38280	609 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	TPS3	P38426	1054 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	SAP30	P38429	201 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	CCT3	P39077	534 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	OSW7	P43611	510 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	PEX29	Q03370	554 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	RRB1	Q04225	511 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	OPY2	Q06810	360 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	RAD61	Q99359	647 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	HCA4	P20448	770 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	RAD57	P25301	460 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	SEC65	P29478	273 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	MGM1	P32266	881 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	RGD1	P38339	666 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	ATG3	P40344	310 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	ATG32	P40458	529 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	YGR153W	P48238	217 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	MRD1	Q06106	887 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	LAM6	Q08001	693 aa		3.41	□□□□□ -1.86
CHS2	YBR038W	RIO1	Q12196	484 aa	Known RBP	3.41	□□□□□ -1.86
CHS2	YBR038W	FLO1	P32768	1537 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	CDC8	P00572	216 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	CHO2	P05374	869 aa	Known RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	MET6	P05694	767 aa	Known RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	RPB2	P08518	1224 aa	Known RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	MTF2	P10849	440 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	MAK16	P10962	306 aa	Predicted RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	NGR1	P32831	672 aa	Known RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	YHL050C	P38721	697 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	ARH1	P48360	493 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	UTP22	P53254	1237 aa	Predicted RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	INM2	Q05533	292 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	YLR287C	Q05881	355 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	THI3	Q07471	609 aa		3.4	□□□□□ -1.86
CHS2	YBR038W	RUD3	Q12234	484 aa	Known RBP	3.4	□□□□□ -1.86
CHS2	YBR038W	PPR1	P07272	904 aa	Predicted RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	THR4	P16120	514 aa	Known RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	SRP54	P20424	541 aa	Known RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	SEC20	P28791	383 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	UGA2	P38067	497 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	SMC2	P38989	1170 aa	Known RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	LYS14	P40971	790 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	MIC19	P43594	170 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	ROG3	P43602	733 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	YJR079W	P47126	109 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	BTN2	P53286	410 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	VTI1	Q04338	217 aa		3.4	□□□□□ -1.87
CHS2	YBR038W	YDR341C	Q05506	607 aa	Known RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	SPP382	Q06411	708 aa	Predicted RBP	3.4	□□□□□ -1.87
CHS2	YBR038W	TOP1	P04786	769 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	RPS6A	P0CX37	236 aa	Known RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	RPS6B	P0CX38	236 aa	Predicted RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	PDR1	P12383	1068 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	SPO12	P17123	173 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	UBP1	P25037	809 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	PRP40	P33203	583 aa	Known RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	SMF1	P38925	575 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	STT3	P39007	718 aa	Known RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	DSN1	P40568	576 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	NMA111	P53920	997 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	EEB1	Q02891	456 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	VPS72	Q03388	795 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	YAP7	Q08182	245 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	YOL098C	Q12496	1037 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	YOR111W	Q99210	232 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	SNF3	P10870	884 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	MIP1	P15801	1254 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	SEC2	P17065	759 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	SDH2	P21801	266 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	SPT8	P38915	602 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	RIO2	P40160	425 aa	Known RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	SDS3	P40505	327 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	YJR039W	P47107	1121 aa		3.39	□□□□□ -1.87
CHS2	YBR038W	NCS2	P53923	493 aa	Predicted RBP	3.39	□□□□□ -1.87
CHS2	YBR038W	RPL22B	P56628	122 aa	Known RBP	3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms