RNA–Protein interactions for RNA: ENST00000503937.5

SEC31A-213, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-213ENST00000503937 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
SEC31A-213ENST00000503937 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
SEC31A-213ENST00000503937 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
SEC31A-213ENST00000503937 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
SEC31A-213ENST00000503937 FOXD1Q16676 465 aa16.13■□□□□ 0.17
SEC31A-213ENST00000503937 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
SEC31A-213ENST00000503937 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
SEC31A-213ENST00000503937 MSH5O43196 834 aa15.28■□□□□ 0.04
SEC31A-213ENST00000503937 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
SEC31A-213ENST00000503937 ADRA2BP18089 450 aa15.06■□□□□ 0
SEC31A-213ENST00000503937 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
SEC31A-213ENST00000503937 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
SEC31A-213ENST00000503937 KCNA4P22459 653 aa14.43□□□□□ -0.1
SEC31A-213ENST00000503937 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
SEC31A-213ENST00000503937 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.18
SEC31A-213ENST00000503937 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
SEC31A-213ENST00000503937 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
SEC31A-213ENST00000503937 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
SEC31A-213ENST00000503937 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
SEC31A-213ENST00000503937 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
SEC31A-213ENST00000503937 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
SEC31A-213ENST00000503937 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
SEC31A-213ENST00000503937 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
SEC31A-213ENST00000503937 ZBTB22O15209 634 aa13.32□□□□□ -0.28
SEC31A-213ENST00000503937 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
SEC31A-213ENST00000503937 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
SEC31A-213ENST00000503937 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
SEC31A-213ENST00000503937 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
SEC31A-213ENST00000503937 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
SEC31A-213ENST00000503937 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
SEC31A-213ENST00000503937 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
SEC31A-213ENST00000503937 HRCP23327 699 aa13.07□□□□□ -0.32
SEC31A-213ENST00000503937 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
SEC31A-213ENST00000503937 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
SEC31A-213ENST00000503937 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
SEC31A-213ENST00000503937 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
SEC31A-213ENST00000503937 MYT1Q01538 1121 aa12.79□□□□□ -0.36
SEC31A-213ENST00000503937 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
SEC31A-213ENST00000503937 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
SEC31A-213ENST00000503937 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
SEC31A-213ENST00000503937 PPARGC1BQ86YN6 1023 aaKnown RBP12.52□□□□□ -0.41
SEC31A-213ENST00000503937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.419e-14■□□□□ 10.6
SEC31A-213ENST00000503937 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
SEC31A-213ENST00000503937 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
SEC31A-213ENST00000503937 ABCC9O60706 1549 aa12.41□□□□□ -0.42
SEC31A-213ENST00000503937 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
SEC31A-213ENST00000503937 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SEC31A-213ENST00000503937 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
SEC31A-213ENST00000503937 SUPT5HO00267 1087 aaKnown RBP12.35□□□□□ -0.43
SEC31A-213ENST00000503937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
SEC31A-213ENST00000503937 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
SEC31A-213ENST00000503937 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
SEC31A-213ENST00000503937 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
SEC31A-213ENST00000503937 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
SEC31A-213ENST00000503937 FKBP8Q14318 412 aa12.24□□□□□ -0.45
SEC31A-213ENST00000503937 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
SEC31A-213ENST00000503937 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
SEC31A-213ENST00000503937 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
SEC31A-213ENST00000503937 NACADO15069 1562 aa12.11□□□□□ -0.47
SEC31A-213ENST00000503937 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
SEC31A-213ENST00000503937 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.47
SEC31A-213ENST00000503937 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
SEC31A-213ENST00000503937 APLP2Q06481 763 aa12.07□□□□□ -0.48
SEC31A-213ENST00000503937 CAPN15O75808 1086 aa12.04□□□□□ -0.48
SEC31A-213ENST00000503937 DSG3P32926 999 aa12.04□□□□□ -0.48
SEC31A-213ENST00000503937 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-213ENST00000503937 SPINK5Q9NQ38 1064 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-213ENST00000503937 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
SEC31A-213ENST00000503937 POTEHQ6S545 545 aa11.98□□□□□ -0.49
SEC31A-213ENST00000503937 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.5
SEC31A-213ENST00000503937 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
SEC31A-213ENST00000503937 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
SEC31A-213ENST00000503937 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
SEC31A-213ENST00000503937 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
SEC31A-213ENST00000503937 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
SEC31A-213ENST00000503937 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-213ENST00000503937 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
SEC31A-213ENST00000503937 POLA2Q14181 598 aa11.79□□□□□ -0.52
SEC31A-213ENST00000503937 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
SEC31A-213ENST00000503937 DIEXFQ68CQ4 756 aaKnown RBP11.75□□□□□ -0.53
SEC31A-213ENST00000503937 FBLN2P98095 1184 aa11.74□□□□□ -0.53
SEC31A-213ENST00000503937 ABCB7O75027 752 aa11.7□□□□□ -0.54
SEC31A-213ENST00000503937 PROM2Q8N271 834 aa11.68□□□□□ -0.54
SEC31A-213ENST00000503937 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
SEC31A-213ENST00000503937 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
SEC31A-213ENST00000503937 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
SEC31A-213ENST00000503937 BICRAQ9NZM4 1560 aa11.63□□□□□ -0.55
SEC31A-213ENST00000503937 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
SEC31A-213ENST00000503937 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.552e-7■■■■□ 22
SEC31A-213ENST00000503937 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
SEC31A-213ENST00000503937 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
SEC31A-213ENST00000503937 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
SEC31A-213ENST00000503937 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
SEC31A-213ENST00000503937 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
SEC31A-213ENST00000503937 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
SEC31A-213ENST00000503937 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
SEC31A-213ENST00000503937 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
SEC31A-213ENST00000503937 YTHDC1Q96MU7 727 aaKnown RBP11.41□□□□□ -0.58
SEC31A-213ENST00000503937 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
SEC31A-213ENST00000503937 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms