RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
AC055720.2-201ENST00000537724 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
AC055720.2-201ENST00000537724 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
AC055720.2-201ENST00000537724 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
AC055720.2-201ENST00000537724 FOXD1Q16676 465 aa16.73■□□□□ 0.27
AC055720.2-201ENST00000537724 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
AC055720.2-201ENST00000537724 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
AC055720.2-201ENST00000537724 ADRA2BP18089 450 aa15.74■□□□□ 0.11
AC055720.2-201ENST00000537724 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
AC055720.2-201ENST00000537724 MSH5O43196 834 aa15.56■□□□□ 0.08
AC055720.2-201ENST00000537724 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
AC055720.2-201ENST00000537724 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
AC055720.2-201ENST00000537724 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
AC055720.2-201ENST00000537724 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
AC055720.2-201ENST00000537724 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
AC055720.2-201ENST00000537724 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
AC055720.2-201ENST00000537724 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
AC055720.2-201ENST00000537724 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
AC055720.2-201ENST00000537724 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
AC055720.2-201ENST00000537724 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
AC055720.2-201ENST00000537724 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
AC055720.2-201ENST00000537724 KCNA4P22459 653 aa13.43□□□□□ -0.26
AC055720.2-201ENST00000537724 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
AC055720.2-201ENST00000537724 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
AC055720.2-201ENST00000537724 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
AC055720.2-201ENST00000537724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC055720.2-201ENST00000537724 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
AC055720.2-201ENST00000537724 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
AC055720.2-201ENST00000537724 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
AC055720.2-201ENST00000537724 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
AC055720.2-201ENST00000537724 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
AC055720.2-201ENST00000537724 CAPN15O75808 1086 aa12.65□□□□□ -0.38
AC055720.2-201ENST00000537724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
AC055720.2-201ENST00000537724 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
AC055720.2-201ENST00000537724 DSG3P32926 999 aa12.53□□□□□ -0.4
AC055720.2-201ENST00000537724 APLP2Q06481 763 aa12.51□□□□□ -0.41
AC055720.2-201ENST00000537724 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
AC055720.2-201ENST00000537724 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
AC055720.2-201ENST00000537724 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
AC055720.2-201ENST00000537724 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
AC055720.2-201ENST00000537724 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
AC055720.2-201ENST00000537724 ABCB7O75027 752 aa12.39□□□□□ -0.43
AC055720.2-201ENST00000537724 ZBTB22O15209 634 aa12.36□□□□□ -0.43
AC055720.2-201ENST00000537724 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
AC055720.2-201ENST00000537724 POLA2Q14181 598 aa12.18□□□□□ -0.46
AC055720.2-201ENST00000537724 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
AC055720.2-201ENST00000537724 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
AC055720.2-201ENST00000537724 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
AC055720.2-201ENST00000537724 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
AC055720.2-201ENST00000537724 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
AC055720.2-201ENST00000537724 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
AC055720.2-201ENST00000537724 POTEHQ6S545 545 aa11.74□□□□□ -0.53
AC055720.2-201ENST00000537724 FBLN2P98095 1184 aa11.71□□□□□ -0.53
AC055720.2-201ENST00000537724 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
AC055720.2-201ENST00000537724 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
AC055720.2-201ENST00000537724 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
AC055720.2-201ENST00000537724 REM2Q8IYK8 340 aaPredicted RBP11.6□□□□□ -0.55
AC055720.2-201ENST00000537724 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
AC055720.2-201ENST00000537724 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
AC055720.2-201ENST00000537724 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
AC055720.2-201ENST00000537724 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
AC055720.2-201ENST00000537724 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
AC055720.2-201ENST00000537724 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
AC055720.2-201ENST00000537724 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
AC055720.2-201ENST00000537724 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
AC055720.2-201ENST00000537724 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.6
AC055720.2-201ENST00000537724 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
AC055720.2-201ENST00000537724 PABPN1Q86U42 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC055720.2-201ENST00000537724 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
AC055720.2-201ENST00000537724 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
AC055720.2-201ENST00000537724 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
AC055720.2-201ENST00000537724 HAX1O00165 279 aa11.14□□□□□ -0.63
AC055720.2-201ENST00000537724 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
AC055720.2-201ENST00000537724 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
AC055720.2-201ENST00000537724 EVX2Q03828 476 aa11.03□□□□□ -0.64
AC055720.2-201ENST00000537724 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
AC055720.2-201ENST00000537724 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
AC055720.2-201ENST00000537724 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
AC055720.2-201ENST00000537724 PROM2Q8N271 834 aa10.93□□□□□ -0.66
AC055720.2-201ENST00000537724 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
AC055720.2-201ENST00000537724 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
AC055720.2-201ENST00000537724 FKBP8Q14318 412 aa10.82□□□□□ -0.68
AC055720.2-201ENST00000537724 GABBR2O75899 941 aa10.77□□□□□ -0.69
AC055720.2-201ENST00000537724 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
AC055720.2-201ENST00000537724 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
AC055720.2-201ENST00000537724 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
AC055720.2-201ENST00000537724 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
AC055720.2-201ENST00000537724 MIER1Q8N108 512 aa10.66□□□□□ -0.7
AC055720.2-201ENST00000537724 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
AC055720.2-201ENST00000537724 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
AC055720.2-201ENST00000537724 CLCN6P51797 869 aa10.61□□□□□ -0.71
AC055720.2-201ENST00000537724 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
AC055720.2-201ENST00000537724 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
AC055720.2-201ENST00000537724 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
AC055720.2-201ENST00000537724 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
AC055720.2-201ENST00000537724 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
AC055720.2-201ENST00000537724 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
AC055720.2-201ENST00000537724 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
AC055720.2-201ENST00000537724 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
AC055720.2-201ENST00000537724 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms