RNA–Protein interactions for RNA: ENST00000552217.5

MRPL42-208, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MRPL42, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-208ENST00000552217 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
MRPL42-208ENST00000552217 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
MRPL42-208ENST00000552217 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
MRPL42-208ENST00000552217 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
MRPL42-208ENST00000552217 FOXD1Q16676 465 aa21.6■■□□□ 1.05
MRPL42-208ENST00000552217 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
MRPL42-208ENST00000552217 MSH5O43196 834 aa20.25■□□□□ 0.83
MRPL42-208ENST00000552217 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
MRPL42-208ENST00000552217 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
MRPL42-208ENST00000552217 ADRA2BP18089 450 aa20.06■□□□□ 0.8
MRPL42-208ENST00000552217 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
MRPL42-208ENST00000552217 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
MRPL42-208ENST00000552217 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
MRPL42-208ENST00000552217 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
MRPL42-208ENST00000552217 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
MRPL42-208ENST00000552217 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
MRPL42-208ENST00000552217 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
MRPL42-208ENST00000552217 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
MRPL42-208ENST00000552217 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
MRPL42-208ENST00000552217 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
MRPL42-208ENST00000552217 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
MRPL42-208ENST00000552217 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
MRPL42-208ENST00000552217 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
MRPL42-208ENST00000552217 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
MRPL42-208ENST00000552217 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
MRPL42-208ENST00000552217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.288e-10■■■□□ 17.4
MRPL42-208ENST00000552217 KCNA4P22459 653 aa16.68■□□□□ 0.26
MRPL42-208ENST00000552217 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
MRPL42-208ENST00000552217 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
MRPL42-208ENST00000552217 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
MRPL42-208ENST00000552217 CAPN15O75808 1086 aa16.17■□□□□ 0.18
MRPL42-208ENST00000552217 DSG3P32926 999 aa16.15■□□□□ 0.18
MRPL42-208ENST00000552217 APLP2Q06481 763 aa16.04■□□□□ 0.16
MRPL42-208ENST00000552217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
MRPL42-208ENST00000552217 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
MRPL42-208ENST00000552217 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
MRPL42-208ENST00000552217 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
MRPL42-208ENST00000552217 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
MRPL42-208ENST00000552217 ABCB7O75027 752 aa15.79■□□□□ 0.12
MRPL42-208ENST00000552217 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
MRPL42-208ENST00000552217 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
MRPL42-208ENST00000552217 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
MRPL42-208ENST00000552217 POLA2Q14181 598 aa15.52■□□□□ 0.08
MRPL42-208ENST00000552217 POTEHQ6S545 545 aa15.5■□□□□ 0.07
MRPL42-208ENST00000552217 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
MRPL42-208ENST00000552217 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
MRPL42-208ENST00000552217 ZBTB22O15209 634 aa15.35■□□□□ 0.05
MRPL42-208ENST00000552217 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
MRPL42-208ENST00000552217 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
MRPL42-208ENST00000552217 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
MRPL42-208ENST00000552217 AKT1S1Q96B36 256 aa15.06■□□□□ 0
MRPL42-208ENST00000552217 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
MRPL42-208ENST00000552217 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
MRPL42-208ENST00000552217 FBLN2P98095 1184 aa14.81□□□□□ -0.04
MRPL42-208ENST00000552217 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
MRPL42-208ENST00000552217 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
MRPL42-208ENST00000552217 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
MRPL42-208ENST00000552217 PITPNM1O00562 1244 aa14.73□□□□□ -0.05
MRPL42-208ENST00000552217 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
MRPL42-208ENST00000552217 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
MRPL42-208ENST00000552217 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
MRPL42-208ENST00000552217 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
MRPL42-208ENST00000552217 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
MRPL42-208ENST00000552217 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
MRPL42-208ENST00000552217 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
MRPL42-208ENST00000552217 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
MRPL42-208ENST00000552217 HAX1O00165 279 aa14.42□□□□□ -0.1
MRPL42-208ENST00000552217 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
MRPL42-208ENST00000552217 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
MRPL42-208ENST00000552217 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
MRPL42-208ENST00000552217 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
MRPL42-208ENST00000552217 EVX2Q03828 476 aa14.26□□□□□ -0.13
MRPL42-208ENST00000552217 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
MRPL42-208ENST00000552217 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
MRPL42-208ENST00000552217 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
MRPL42-208ENST00000552217 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
MRPL42-208ENST00000552217 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
MRPL42-208ENST00000552217 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
MRPL42-208ENST00000552217 GABBR2O75899 941 aa13.95□□□□□ -0.18
MRPL42-208ENST00000552217 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
MRPL42-208ENST00000552217 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
MRPL42-208ENST00000552217 CLCN6P51797 869 aa13.81□□□□□ -0.2
MRPL42-208ENST00000552217 PROM2Q8N271 834 aa13.72□□□□□ -0.21
MRPL42-208ENST00000552217 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
MRPL42-208ENST00000552217 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
MRPL42-208ENST00000552217 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
MRPL42-208ENST00000552217 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
MRPL42-208ENST00000552217 LHX8Q68G74 356 aa13.61□□□□□ -0.23
MRPL42-208ENST00000552217 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
MRPL42-208ENST00000552217 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
MRPL42-208ENST00000552217 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
MRPL42-208ENST00000552217 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
MRPL42-208ENST00000552217 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
MRPL42-208ENST00000552217 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
MRPL42-208ENST00000552217 MIER1Q8N108 512 aa13.32□□□□□ -0.28
MRPL42-208ENST00000552217 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
MRPL42-208ENST00000552217 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
MRPL42-208ENST00000552217 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
MRPL42-208ENST00000552217 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
MRPL42-208ENST00000552217 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms