RNA–Protein interactions for RNA: ENST00000532048.5

CELF1-215, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 1 (best) BASIC

Gene CELF1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-215ENST00000532048 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
CELF1-215ENST00000532048 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
CELF1-215ENST00000532048 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
CELF1-215ENST00000532048 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
CELF1-215ENST00000532048 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
CELF1-215ENST00000532048 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
CELF1-215ENST00000532048 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
CELF1-215ENST00000532048 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
CELF1-215ENST00000532048 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
CELF1-215ENST00000532048 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
CELF1-215ENST00000532048 ABCC9O60706 1549 aa13.95□□□□□ -0.18
CELF1-215ENST00000532048 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
CELF1-215ENST00000532048 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
CELF1-215ENST00000532048 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
CELF1-215ENST00000532048 HRCP23327 699 aa13.84□□□□□ -0.19
CELF1-215ENST00000532048 NACADO15069 1562 aa13.76□□□□□ -0.21
CELF1-215ENST00000532048 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
CELF1-215ENST00000532048 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
CELF1-215ENST00000532048 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
CELF1-215ENST00000532048 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
CELF1-215ENST00000532048 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
CELF1-215ENST00000532048 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
CELF1-215ENST00000532048 PPARGC1BQ86YN6 1023 aaKnown RBP13.58□□□□□ -0.23
CELF1-215ENST00000532048 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
CELF1-215ENST00000532048 WIZO95785 1651 aa13.55□□□□□ -0.24
CELF1-215ENST00000532048 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
CELF1-215ENST00000532048 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
CELF1-215ENST00000532048 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
CELF1-215ENST00000532048 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
CELF1-215ENST00000532048 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
CELF1-215ENST00000532048 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
CELF1-215ENST00000532048 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
CELF1-215ENST00000532048 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
CELF1-215ENST00000532048 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
CELF1-215ENST00000532048 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
CELF1-215ENST00000532048 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
CELF1-215ENST00000532048 SOGA1O94964 1423 aa13.15□□□□□ -0.3
CELF1-215ENST00000532048 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
CELF1-215ENST00000532048 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
CELF1-215ENST00000532048 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
CELF1-215ENST00000532048 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
CELF1-215ENST00000532048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
CELF1-215ENST00000532048 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.31
CELF1-215ENST00000532048 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
CELF1-215ENST00000532048 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
CELF1-215ENST00000532048 EEA1Q15075 1411 aa13.06□□□□□ -0.32
CELF1-215ENST00000532048 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
CELF1-215ENST00000532048 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
CELF1-215ENST00000532048 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
CELF1-215ENST00000532048 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
CELF1-215ENST00000532048 GOLGA3Q08378 1498 aa12.99□□□□□ -0.33
CELF1-215ENST00000532048 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
CELF1-215ENST00000532048 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
CELF1-215ENST00000532048 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
CELF1-215ENST00000532048 CLIP1P30622 1438 aa12.86□□□□□ -0.35
CELF1-215ENST00000532048 KIF21BO75037 1637 aa12.86□□□□□ -0.35
CELF1-215ENST00000532048 RAPGEF2Q9Y4G8 1499 aa12.83□□□□□ -0.36
CELF1-215ENST00000532048 APLP2Q06481 763 aa12.83□□□□□ -0.36
CELF1-215ENST00000532048 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
CELF1-215ENST00000532048 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
CELF1-215ENST00000532048 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
CELF1-215ENST00000532048 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
CELF1-215ENST00000532048 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
CELF1-215ENST00000532048 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
CELF1-215ENST00000532048 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
CELF1-215ENST00000532048 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
CELF1-215ENST00000532048 CUX1P39880 1505 aa12.68□□□□□ -0.38
CELF1-215ENST00000532048 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
CELF1-215ENST00000532048 PRXQ9BXM0 1461 aa12.68□□□□□ -0.38
CELF1-215ENST00000532048 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
CELF1-215ENST00000532048 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
CELF1-215ENST00000532048 CFTRP13569 1480 aa12.65□□□□□ -0.38
CELF1-215ENST00000532048 ACIN1Q9UKV3 1341 aaKnown RBP12.64□□□□□ -0.39
CELF1-215ENST00000532048 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
CELF1-215ENST00000532048 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
CELF1-215ENST00000532048 CENPBP07199 599 aaPredicted RBP12.61□□□□□ -0.39
CELF1-215ENST00000532048 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
CELF1-215ENST00000532048 CUX2O14529 1486 aa12.54□□□□□ -0.4
CELF1-215ENST00000532048 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
CELF1-215ENST00000532048 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.4
CELF1-215ENST00000532048 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
CELF1-215ENST00000532048 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
CELF1-215ENST00000532048 IGF1RP08069 1367 aa12.51□□□□□ -0.41
CELF1-215ENST00000532048 ITGAEP38570 1179 aa12.5□□□□□ -0.41
CELF1-215ENST00000532048 MIER1Q8N108 512 aa12.5□□□□□ -0.41
CELF1-215ENST00000532048 DHX57Q6P158 1386 aaKnown RBP12.48□□□□□ -0.41
CELF1-215ENST00000532048 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
CELF1-215ENST00000532048 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
CELF1-215ENST00000532048 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
CELF1-215ENST00000532048 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
CELF1-215ENST00000532048 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
CELF1-215ENST00000532048 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.42
CELF1-215ENST00000532048 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
CELF1-215ENST00000532048 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
CELF1-215ENST00000532048 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
CELF1-215ENST00000532048 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
CELF1-215ENST00000532048 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
CELF1-215ENST00000532048 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
CELF1-215ENST00000532048 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
CELF1-215ENST00000532048 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms