RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
PNN-206ENST00000557680 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
PNN-206ENST00000557680 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
PNN-206ENST00000557680 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
PNN-206ENST00000557680 FOXD1Q16676 465 aa18.62■□□□□ 0.57
PNN-206ENST00000557680 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
PNN-206ENST00000557680 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
PNN-206ENST00000557680 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
PNN-206ENST00000557680 ADRA2BP18089 450 aa17.42■□□□□ 0.38
PNN-206ENST00000557680 MSH5O43196 834 aa17.41■□□□□ 0.38
PNN-206ENST00000557680 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
PNN-206ENST00000557680 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
PNN-206ENST00000557680 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
PNN-206ENST00000557680 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
PNN-206ENST00000557680 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
PNN-206ENST00000557680 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
PNN-206ENST00000557680 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
PNN-206ENST00000557680 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
PNN-206ENST00000557680 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
PNN-206ENST00000557680 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
PNN-206ENST00000557680 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
PNN-206ENST00000557680 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
PNN-206ENST00000557680 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
PNN-206ENST00000557680 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
PNN-206ENST00000557680 KCNA4P22459 653 aa14.66□□□□□ -0.06
PNN-206ENST00000557680 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
PNN-206ENST00000557680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.077e-16■■■□□ 16.2
PNN-206ENST00000557680 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
PNN-206ENST00000557680 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
PNN-206ENST00000557680 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
PNN-206ENST00000557680 CAPN15O75808 1086 aa14.06□□□□□ -0.16
PNN-206ENST00000557680 DSG3P32926 999 aa13.93□□□□□ -0.18
PNN-206ENST00000557680 APLP2Q06481 763 aa13.92□□□□□ -0.18
PNN-206ENST00000557680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
PNN-206ENST00000557680 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
PNN-206ENST00000557680 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
PNN-206ENST00000557680 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
PNN-206ENST00000557680 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
PNN-206ENST00000557680 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
PNN-206ENST00000557680 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
PNN-206ENST00000557680 ABCB7O75027 752 aa13.75□□□□□ -0.21
PNN-206ENST00000557680 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
PNN-206ENST00000557680 POLA2Q14181 598 aa13.48□□□□□ -0.25
PNN-206ENST00000557680 ZBTB22O15209 634 aa13.46□□□□□ -0.25
PNN-206ENST00000557680 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
PNN-206ENST00000557680 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
PNN-206ENST00000557680 POTEHQ6S545 545 aa13.25□□□□□ -0.29
PNN-206ENST00000557680 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
PNN-206ENST00000557680 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
PNN-206ENST00000557680 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
PNN-206ENST00000557680 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
PNN-206ENST00000557680 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
PNN-206ENST00000557680 FBLN2P98095 1184 aa12.93□□□□□ -0.34
PNN-206ENST00000557680 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
PNN-206ENST00000557680 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
PNN-206ENST00000557680 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
PNN-206ENST00000557680 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
PNN-206ENST00000557680 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
PNN-206ENST00000557680 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
PNN-206ENST00000557680 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
PNN-206ENST00000557680 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
PNN-206ENST00000557680 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
PNN-206ENST00000557680 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
PNN-206ENST00000557680 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
PNN-206ENST00000557680 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■■□□□ 14.2
PNN-206ENST00000557680 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
PNN-206ENST00000557680 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
PNN-206ENST00000557680 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
PNN-206ENST00000557680 HAX1O00165 279 aa12.47□□□□□ -0.41
PNN-206ENST00000557680 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
PNN-206ENST00000557680 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
PNN-206ENST00000557680 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
PNN-206ENST00000557680 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
PNN-206ENST00000557680 EVX2Q03828 476 aa12.28□□□□□ -0.44
PNN-206ENST00000557680 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
PNN-206ENST00000557680 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
PNN-206ENST00000557680 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
PNN-206ENST00000557680 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
PNN-206ENST00000557680 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
PNN-206ENST00000557680 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
PNN-206ENST00000557680 GABBR2O75899 941 aa12.02□□□□□ -0.49
PNN-206ENST00000557680 PROM2Q8N271 834 aa11.94□□□□□ -0.5
PNN-206ENST00000557680 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
PNN-206ENST00000557680 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
PNN-206ENST00000557680 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
PNN-206ENST00000557680 CLCN6P51797 869 aa11.84□□□□□ -0.51
PNN-206ENST00000557680 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
PNN-206ENST00000557680 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
PNN-206ENST00000557680 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
PNN-206ENST00000557680 FKBP8Q14318 412 aa11.74□□□□□ -0.53
PNN-206ENST00000557680 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
PNN-206ENST00000557680 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
PNN-206ENST00000557680 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
PNN-206ENST00000557680 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
PNN-206ENST00000557680 MIER1Q8N108 512 aa11.7□□□□□ -0.54
PNN-206ENST00000557680 LHX8Q68G74 356 aa11.68□□□□□ -0.54
PNN-206ENST00000557680 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
PNN-206ENST00000557680 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
PNN-206ENST00000557680 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
PNN-206ENST00000557680 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms