RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
SEC23B-203ENST00000377465 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
SEC23B-203ENST00000377465 ZCCHC6Q5VYS8 1495 aaKnown RBP21.03■□□□□ 0.96
SEC23B-203ENST00000377465 DCAF1Q9Y4B6 1507 aa20.97■□□□□ 0.95
SEC23B-203ENST00000377465 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
SEC23B-203ENST00000377465 NACADO15069 1562 aa20.43■□□□□ 0.86
SEC23B-203ENST00000377465 ABCC9O60706 1549 aa20.18■□□□□ 0.82
SEC23B-203ENST00000377465 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
SEC23B-203ENST00000377465 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
SEC23B-203ENST00000377465 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
SEC23B-203ENST00000377465 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
SEC23B-203ENST00000377465 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
SEC23B-203ENST00000377465 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
SEC23B-203ENST00000377465 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
SEC23B-203ENST00000377465 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
SEC23B-203ENST00000377465 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
SEC23B-203ENST00000377465 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
SEC23B-203ENST00000377465 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
SEC23B-203ENST00000377465 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
SEC23B-203ENST00000377465 WIZO95785 1651 aa18.99■□□□□ 0.63
SEC23B-203ENST00000377465 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
SEC23B-203ENST00000377465 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
SEC23B-203ENST00000377465 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
SEC23B-203ENST00000377465 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
SEC23B-203ENST00000377465 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
SEC23B-203ENST00000377465 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
SEC23B-203ENST00000377465 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
SEC23B-203ENST00000377465 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
SEC23B-203ENST00000377465 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
SEC23B-203ENST00000377465 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.57
SEC23B-203ENST00000377465 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
SEC23B-203ENST00000377465 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
SEC23B-203ENST00000377465 CFTRP13569 1480 aa18.29■□□□□ 0.52
SEC23B-203ENST00000377465 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
SEC23B-203ENST00000377465 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
SEC23B-203ENST00000377465 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
SEC23B-203ENST00000377465 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
SEC23B-203ENST00000377465 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
SEC23B-203ENST00000377465 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
SEC23B-203ENST00000377465 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
SEC23B-203ENST00000377465 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
SEC23B-203ENST00000377465 CUX1P39880 1505 aa17.94■□□□□ 0.46
SEC23B-203ENST00000377465 EEA1Q15075 1411 aa17.93■□□□□ 0.46
SEC23B-203ENST00000377465 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
SEC23B-203ENST00000377465 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
SEC23B-203ENST00000377465 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
SEC23B-203ENST00000377465 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
SEC23B-203ENST00000377465 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
SEC23B-203ENST00000377465 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
SEC23B-203ENST00000377465 KIF21BO75037 1637 aa17.79■□□□□ 0.44
SEC23B-203ENST00000377465 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
SEC23B-203ENST00000377465 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
SEC23B-203ENST00000377465 NESP48681 1621 aa17.78■□□□□ 0.44
SEC23B-203ENST00000377465 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
SEC23B-203ENST00000377465 WDR62O43379 1518 aa17.73■□□□□ 0.43
SEC23B-203ENST00000377465 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
SEC23B-203ENST00000377465 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
SEC23B-203ENST00000377465 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
SEC23B-203ENST00000377465 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
SEC23B-203ENST00000377465 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
SEC23B-203ENST00000377465 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
SEC23B-203ENST00000377465 FGD5Q6ZNL6 1462 aa17.66■□□□□ 0.42
SEC23B-203ENST00000377465 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
SEC23B-203ENST00000377465 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
SEC23B-203ENST00000377465 SOGA1O94964 1423 aa17.63■□□□□ 0.41
SEC23B-203ENST00000377465 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
SEC23B-203ENST00000377465 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
SEC23B-203ENST00000377465 CUL7Q14999 1698 aa17.58■□□□□ 0.41
SEC23B-203ENST00000377465 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
SEC23B-203ENST00000377465 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
SEC23B-203ENST00000377465 HRCP23327 699 aa17.54■□□□□ 0.4
SEC23B-203ENST00000377465 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
SEC23B-203ENST00000377465 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
SEC23B-203ENST00000377465 CUX2O14529 1486 aa17.48■□□□□ 0.39
SEC23B-203ENST00000377465 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
SEC23B-203ENST00000377465 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
SEC23B-203ENST00000377465 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
SEC23B-203ENST00000377465 IGF1RP08069 1367 aa17.39■□□□□ 0.37
SEC23B-203ENST00000377465 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
SEC23B-203ENST00000377465 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
SEC23B-203ENST00000377465 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
SEC23B-203ENST00000377465 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
SEC23B-203ENST00000377465 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
SEC23B-203ENST00000377465 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
SEC23B-203ENST00000377465 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
SEC23B-203ENST00000377465 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
SEC23B-203ENST00000377465 MYT1Q01538 1121 aa17.28■□□□□ 0.36
SEC23B-203ENST00000377465 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
SEC23B-203ENST00000377465 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
SEC23B-203ENST00000377465 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
SEC23B-203ENST00000377465 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
SEC23B-203ENST00000377465 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
SEC23B-203ENST00000377465 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
SEC23B-203ENST00000377465 EFCAB5A4FU69 1503 aa17.21■□□□□ 0.35
SEC23B-203ENST00000377465 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
SEC23B-203ENST00000377465 SAMD9Q5K651 1589 aa17.21■□□□□ 0.34
SEC23B-203ENST00000377465 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
SEC23B-203ENST00000377465 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
SEC23B-203ENST00000377465 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
SEC23B-203ENST00000377465 CLIP1P30622 1438 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms