RNA–Protein interactions for RNA: ENST00000545380.5

CADM1-218, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-218ENST00000545380 NISCHQ9Y2I1 1504 aa36.87■■■■□ 3.49
CADM1-218ENST00000545380 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
CADM1-218ENST00000545380 ZCCHC6Q5VYS8 1495 aaKnown RBP31.19■■■□□ 2.58
CADM1-218ENST00000545380 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
CADM1-218ENST00000545380 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
CADM1-218ENST00000545380 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
CADM1-218ENST00000545380 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
CADM1-218ENST00000545380 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
CADM1-218ENST00000545380 ABCC9O60706 1549 aa29.43■■■□□ 2.3
CADM1-218ENST00000545380 NACADO15069 1562 aa29.34■■■□□ 2.29
CADM1-218ENST00000545380 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
CADM1-218ENST00000545380 CHIC1Q5VXU3 224 aa29.21■■■□□ 2.27
CADM1-218ENST00000545380 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CADM1-218ENST00000545380 RB1CC1Q8TDY2 1594 aa28.85■■■□□ 2.21
CADM1-218ENST00000545380 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
CADM1-218ENST00000545380 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
CADM1-218ENST00000545380 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
CADM1-218ENST00000545380 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
CADM1-218ENST00000545380 WIZO95785 1651 aa28.34■■■□□ 2.13
CADM1-218ENST00000545380 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
CADM1-218ENST00000545380 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
CADM1-218ENST00000545380 TOP2AP11388 1531 aaKnown RBP28.1■■■□□ 2.09
CADM1-218ENST00000545380 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
CADM1-218ENST00000545380 LOC105371045A0A1W2PR82 267 aa28.06■■■□□ 2.08
CADM1-218ENST00000545380 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.06
CADM1-218ENST00000545380 HRCP23327 699 aa27.88■■■□□ 2.05
CADM1-218ENST00000545380 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
CADM1-218ENST00000545380 PCGF6Q9BYE7 350 aa27.83■■■□□ 2.05
CADM1-218ENST00000545380 PEG3Q9GZU2 1588 aa27.83■■■□□ 2.05
CADM1-218ENST00000545380 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
CADM1-218ENST00000545380 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
CADM1-218ENST00000545380 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
CADM1-218ENST00000545380 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
CADM1-218ENST00000545380 ABCC8Q09428 1581 aa27.49■■□□□ 1.99
CADM1-218ENST00000545380 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
CADM1-218ENST00000545380 EEA1Q15075 1411 aa27.42■■□□□ 1.98
CADM1-218ENST00000545380 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
CADM1-218ENST00000545380 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
CADM1-218ENST00000545380 SOGA1O94964 1423 aa27.14■■□□□ 1.94
CADM1-218ENST00000545380 HMGXB3Q12766 1538 aa27.14■■□□□ 1.93
CADM1-218ENST00000545380 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
CADM1-218ENST00000545380 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
CADM1-218ENST00000545380 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CADM1-218ENST00000545380 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
CADM1-218ENST00000545380 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
CADM1-218ENST00000545380 NCAPD3P42695 1498 aa27.04■■□□□ 1.92
CADM1-218ENST00000545380 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
CADM1-218ENST00000545380 CEP162Q5TB80 1403 aa27.03■■□□□ 1.92
CADM1-218ENST00000545380 KIF21BO75037 1637 aa27.02■■□□□ 1.92
CADM1-218ENST00000545380 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
CADM1-218ENST00000545380 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.91
CADM1-218ENST00000545380 TOP2BQ02880 1626 aa26.95■■□□□ 1.9
CADM1-218ENST00000545380 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
CADM1-218ENST00000545380 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
CADM1-218ENST00000545380 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
CADM1-218ENST00000545380 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
CADM1-218ENST00000545380 CFTRP13569 1480 aa26.71■■□□□ 1.87
CADM1-218ENST00000545380 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
CADM1-218ENST00000545380 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
CADM1-218ENST00000545380 CLIP1P30622 1438 aa26.6■■□□□ 1.85
CADM1-218ENST00000545380 CUX1P39880 1505 aa26.59■■□□□ 1.85
CADM1-218ENST00000545380 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
CADM1-218ENST00000545380 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
CADM1-218ENST00000545380 VPS8Q8N3P4 1428 aa26.54■■□□□ 1.84
CADM1-218ENST00000545380 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
CADM1-218ENST00000545380 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
CADM1-218ENST00000545380 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.81
CADM1-218ENST00000545380 CCER1Q8TC90 406 aaPredicted RBP26.36■■□□□ 1.81
CADM1-218ENST00000545380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
CADM1-218ENST00000545380 APLP2Q06481 763 aa26.25■■□□□ 1.79
CADM1-218ENST00000545380 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
CADM1-218ENST00000545380 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
CADM1-218ENST00000545380 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
CADM1-218ENST00000545380 CUX2O14529 1486 aa26.14■■□□□ 1.78
CADM1-218ENST00000545380 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
CADM1-218ENST00000545380 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
CADM1-218ENST00000545380 IGF1RP08069 1367 aa26.08■■□□□ 1.77
CADM1-218ENST00000545380 ARHGAP35Q9NRY4 1499 aa26.05■■□□□ 1.76
CADM1-218ENST00000545380 LAMC3Q9Y6N6 1575 aa26.01■■□□□ 1.75
CADM1-218ENST00000545380 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
CADM1-218ENST00000545380 MAP3K1Q13233 1512 aa25.98■■□□□ 1.75
CADM1-218ENST00000545380 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
CADM1-218ENST00000545380 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
CADM1-218ENST00000545380 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
CADM1-218ENST00000545380 CUL7Q14999 1698 aa25.93■■□□□ 1.74
CADM1-218ENST00000545380 RRBP1Q9P2E9 1410 aaKnown RBP25.92■■□□□ 1.74
CADM1-218ENST00000545380 POLA1P09884 1462 aaPredicted RBP25.89■■□□□ 1.73
CADM1-218ENST00000545380 HNRNPUL2Q1KMD3 747 aaKnown RBP25.89■■□□□ 1.73
CADM1-218ENST00000545380 WDR97A6NE52 1622 aa25.86■■□□□ 1.73
CADM1-218ENST00000545380 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
CADM1-218ENST00000545380 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
CADM1-218ENST00000545380 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
CADM1-218ENST00000545380 NESP48681 1621 aa25.81■■□□□ 1.72
CADM1-218ENST00000545380 EFCAB5A4FU69 1503 aa25.8■■□□□ 1.72
CADM1-218ENST00000545380 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
CADM1-218ENST00000545380 CTTNBP2Q8WZ74 1663 aa25.79■■□□□ 1.72
CADM1-218ENST00000545380 CFAP43Q8NDM7 1665 aa25.76■■□□□ 1.72
CADM1-218ENST00000545380 RAD54L2Q9Y4B4 1467 aa25.76■■□□□ 1.71
CADM1-218ENST00000545380 DIEXFQ68CQ4 756 aaKnown RBP25.74■■□□□ 1.71
CADM1-218ENST00000545380 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms