RNA–Protein interactions for RNA: ENST00000216832.8

PNN-201, Transcript of pinin, desmosome associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNN, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-201ENST00000216832 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
PNN-201ENST00000216832 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
PNN-201ENST00000216832 ABCC9O60706 1549 aa14.52□□□□□ -0.08
PNN-201ENST00000216832 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.174e-6■□□□□ 10.7
PNN-201ENST00000216832 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
PNN-201ENST00000216832 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
PNN-201ENST00000216832 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
PNN-201ENST00000216832 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
PNN-201ENST00000216832 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
PNN-201ENST00000216832 NACADO15069 1562 aa12.97□□□□□ -0.33
PNN-201ENST00000216832 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
PNN-201ENST00000216832 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
PNN-201ENST00000216832 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
PNN-201ENST00000216832 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
PNN-201ENST00000216832 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
PNN-201ENST00000216832 FBLN2P98095 1184 aa12.62□□□□□ -0.39
PNN-201ENST00000216832 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
PNN-201ENST00000216832 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
PNN-201ENST00000216832 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
PNN-201ENST00000216832 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
PNN-201ENST00000216832 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
PNN-201ENST00000216832 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
PNN-201ENST00000216832 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
PNN-201ENST00000216832 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
PNN-201ENST00000216832 HRCP23327 699 aa12.36□□□□□ -0.43
PNN-201ENST00000216832 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
PNN-201ENST00000216832 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
PNN-201ENST00000216832 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
PNN-201ENST00000216832 NESP48681 1621 aa12.27□□□□□ -0.44
PNN-201ENST00000216832 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
PNN-201ENST00000216832 CYB5RLQ6IPT4 315 aa12.25□□□□□ -0.45
PNN-201ENST00000216832 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
PNN-201ENST00000216832 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
PNN-201ENST00000216832 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
PNN-201ENST00000216832 CHIC1Q5VXU3 224 aa12.19□□□□□ -0.46
PNN-201ENST00000216832 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
PNN-201ENST00000216832 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
PNN-201ENST00000216832 RANGAP1P46060 587 aaPredicted RBP12.16□□□□□ -0.46
PNN-201ENST00000216832 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
PNN-201ENST00000216832 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
PNN-201ENST00000216832 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
PNN-201ENST00000216832 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
PNN-201ENST00000216832 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
PNN-201ENST00000216832 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
PNN-201ENST00000216832 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.48
PNN-201ENST00000216832 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
PNN-201ENST00000216832 SMARCA4P51532 1647 aa11.96□□□□□ -0.49
PNN-201ENST00000216832 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
PNN-201ENST00000216832 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
PNN-201ENST00000216832 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
PNN-201ENST00000216832 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
PNN-201ENST00000216832 FANCD2Q9BXW9 1451 aa11.93□□□□□ -0.5
PNN-201ENST00000216832 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
PNN-201ENST00000216832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
PNN-201ENST00000216832 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
PNN-201ENST00000216832 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
PNN-201ENST00000216832 CUX2O14529 1486 aa11.91□□□□□ -0.5
PNN-201ENST00000216832 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
PNN-201ENST00000216832 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
PNN-201ENST00000216832 WIZO95785 1651 aa11.86□□□□□ -0.51
PNN-201ENST00000216832 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
PNN-201ENST00000216832 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
PNN-201ENST00000216832 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.523e-18■■■■■ 28.1
PNN-201ENST00000216832 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
PNN-201ENST00000216832 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
PNN-201ENST00000216832 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
PNN-201ENST00000216832 SOGA1O94964 1423 aa11.76□□□□□ -0.53
PNN-201ENST00000216832 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
PNN-201ENST00000216832 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
PNN-201ENST00000216832 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
PNN-201ENST00000216832 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
PNN-201ENST00000216832 RAD54L2Q9Y4B4 1467 aa11.69□□□□□ -0.54
PNN-201ENST00000216832 ZNF608Q9ULD9 1512 aaPredicted RBP11.68□□□□□ -0.54
PNN-201ENST00000216832 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
PNN-201ENST00000216832 CFTRP13569 1480 aa11.65□□□□□ -0.54
PNN-201ENST00000216832 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
PNN-201ENST00000216832 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
PNN-201ENST00000216832 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
PNN-201ENST00000216832 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
PNN-201ENST00000216832 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
PNN-201ENST00000216832 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
PNN-201ENST00000216832 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
PNN-201ENST00000216832 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
PNN-201ENST00000216832 IFT140Q96RY7 1462 aa11.56□□□□□ -0.56
PNN-201ENST00000216832 ARID4BQ4LE39 1312 aaPredicted RBP11.56□□□□□ -0.56
PNN-201ENST00000216832 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
PNN-201ENST00000216832 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
PNN-201ENST00000216832 CENPBP07199 599 aaPredicted RBP11.51□□□□□ -0.57
PNN-201ENST00000216832 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
PNN-201ENST00000216832 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
PNN-201ENST00000216832 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
PNN-201ENST00000216832 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
PNN-201ENST00000216832 GAPVD1Q14C86 1478 aa11.47□□□□□ -0.57
PNN-201ENST00000216832 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
PNN-201ENST00000216832 MLECQ14165 292 aa11.45□□□□□ -0.58
PNN-201ENST00000216832 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
PNN-201ENST00000216832 WDR62O43379 1518 aa11.44□□□□□ -0.58
PNN-201ENST00000216832 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
PNN-201ENST00000216832 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
PNN-201ENST00000216832 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms