RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
SEC23B-204ENST00000377475 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
SEC23B-204ENST00000377475 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
SEC23B-204ENST00000377475 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
SEC23B-204ENST00000377475 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
SEC23B-204ENST00000377475 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
SEC23B-204ENST00000377475 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
SEC23B-204ENST00000377475 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
SEC23B-204ENST00000377475 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
SEC23B-204ENST00000377475 HRCP23327 699 aa18.92■□□□□ 0.62
SEC23B-204ENST00000377475 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
SEC23B-204ENST00000377475 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
SEC23B-204ENST00000377475 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
SEC23B-204ENST00000377475 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
SEC23B-204ENST00000377475 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
SEC23B-204ENST00000377475 TRIM26Q12899 539 aaPredicted RBP18.35■□□□□ 0.53
SEC23B-204ENST00000377475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.49
SEC23B-204ENST00000377475 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
SEC23B-204ENST00000377475 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
SEC23B-204ENST00000377475 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
SEC23B-204ENST00000377475 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
SEC23B-204ENST00000377475 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
SEC23B-204ENST00000377475 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.45
SEC23B-204ENST00000377475 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
SEC23B-204ENST00000377475 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
SEC23B-204ENST00000377475 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
SEC23B-204ENST00000377475 ABCC9O60706 1549 aa17.73■□□□□ 0.43
SEC23B-204ENST00000377475 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
SEC23B-204ENST00000377475 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
SEC23B-204ENST00000377475 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
SEC23B-204ENST00000377475 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
SEC23B-204ENST00000377475 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
SEC23B-204ENST00000377475 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
SEC23B-204ENST00000377475 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
SEC23B-204ENST00000377475 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
SEC23B-204ENST00000377475 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
SEC23B-204ENST00000377475 ACIN1Q9UKV3 1341 aaKnown RBP17.46■□□□□ 0.39
SEC23B-204ENST00000377475 APLP2Q06481 763 aa17.41■□□□□ 0.38
SEC23B-204ENST00000377475 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
SEC23B-204ENST00000377475 ITGAEP38570 1179 aa17.33■□□□□ 0.37
SEC23B-204ENST00000377475 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
SEC23B-204ENST00000377475 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
SEC23B-204ENST00000377475 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
SEC23B-204ENST00000377475 MIER1Q8N108 512 aa17.21■□□□□ 0.34
SEC23B-204ENST00000377475 SOGA1O94964 1423 aa17.18■□□□□ 0.34
SEC23B-204ENST00000377475 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
SEC23B-204ENST00000377475 WIZO95785 1651 aa17.16■□□□□ 0.34
SEC23B-204ENST00000377475 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
SEC23B-204ENST00000377475 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
SEC23B-204ENST00000377475 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
SEC23B-204ENST00000377475 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
SEC23B-204ENST00000377475 BCANQ96GW7 911 aa16.99■□□□□ 0.31
SEC23B-204ENST00000377475 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
SEC23B-204ENST00000377475 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
SEC23B-204ENST00000377475 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
SEC23B-204ENST00000377475 CLIP1P30622 1438 aa16.83■□□□□ 0.29
SEC23B-204ENST00000377475 NACADO15069 1562 aa16.81■□□□□ 0.28
SEC23B-204ENST00000377475 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
SEC23B-204ENST00000377475 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
SEC23B-204ENST00000377475 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
SEC23B-204ENST00000377475 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.27
SEC23B-204ENST00000377475 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.27
SEC23B-204ENST00000377475 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
SEC23B-204ENST00000377475 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
SEC23B-204ENST00000377475 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
SEC23B-204ENST00000377475 MYT1Q01538 1121 aa16.65■□□□□ 0.26
SEC23B-204ENST00000377475 TRIM52Q96A61 297 aa16.64■□□□□ 0.25
SEC23B-204ENST00000377475 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
SEC23B-204ENST00000377475 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
SEC23B-204ENST00000377475 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
SEC23B-204ENST00000377475 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
SEC23B-204ENST00000377475 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
SEC23B-204ENST00000377475 FKBP8Q14318 412 aa16.59■□□□□ 0.25
SEC23B-204ENST00000377475 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
SEC23B-204ENST00000377475 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
SEC23B-204ENST00000377475 EEA1Q15075 1411 aa16.55■□□□□ 0.24
SEC23B-204ENST00000377475 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
SEC23B-204ENST00000377475 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
SEC23B-204ENST00000377475 NEFLP07196 543 aa16.54■□□□□ 0.24
SEC23B-204ENST00000377475 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.23
SEC23B-204ENST00000377475 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
SEC23B-204ENST00000377475 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
SEC23B-204ENST00000377475 DHX57Q6P158 1386 aaKnown RBP16.46■□□□□ 0.23
SEC23B-204ENST00000377475 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SEC23B-204ENST00000377475 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
SEC23B-204ENST00000377475 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
SEC23B-204ENST00000377475 ANP32CO43423 234 aa16.37■□□□□ 0.21
SEC23B-204ENST00000377475 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
SEC23B-204ENST00000377475 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
SEC23B-204ENST00000377475 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
SEC23B-204ENST00000377475 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
SEC23B-204ENST00000377475 KIF21BO75037 1637 aa16.32■□□□□ 0.2
SEC23B-204ENST00000377475 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
SEC23B-204ENST00000377475 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
SEC23B-204ENST00000377475 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
SEC23B-204ENST00000377475 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
SEC23B-204ENST00000377475 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
SEC23B-204ENST00000377475 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
SEC23B-204ENST00000377475 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
SEC23B-204ENST00000377475 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms