RNA–Protein interactions for RNA: ENST00000395292.6

CELF1-205, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CELF1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-205ENST00000395292 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
CELF1-205ENST00000395292 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
CELF1-205ENST00000395292 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
CELF1-205ENST00000395292 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
CELF1-205ENST00000395292 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
CELF1-205ENST00000395292 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
CELF1-205ENST00000395292 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
CELF1-205ENST00000395292 ABCC9O60706 1549 aa15.78■□□□□ 0.12
CELF1-205ENST00000395292 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
CELF1-205ENST00000395292 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
CELF1-205ENST00000395292 NACADO15069 1562 aa15.6■□□□□ 0.09
CELF1-205ENST00000395292 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
CELF1-205ENST00000395292 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
CELF1-205ENST00000395292 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
CELF1-205ENST00000395292 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
CELF1-205ENST00000395292 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
CELF1-205ENST00000395292 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
CELF1-205ENST00000395292 WIZO95785 1651 aa15.05■□□□□ -0
CELF1-205ENST00000395292 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
CELF1-205ENST00000395292 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
CELF1-205ENST00000395292 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
CELF1-205ENST00000395292 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
CELF1-205ENST00000395292 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
CELF1-205ENST00000395292 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
CELF1-205ENST00000395292 TOP2AP11388 1531 aaKnown RBP14.86□□□□□ -0.03
CELF1-205ENST00000395292 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
CELF1-205ENST00000395292 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
CELF1-205ENST00000395292 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
CELF1-205ENST00000395292 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
CELF1-205ENST00000395292 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
CELF1-205ENST00000395292 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
CELF1-205ENST00000395292 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
CELF1-205ENST00000395292 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
CELF1-205ENST00000395292 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
CELF1-205ENST00000395292 PCGF6Q9BYE7 350 aa14.53□□□□□ -0.08
CELF1-205ENST00000395292 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
CELF1-205ENST00000395292 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
CELF1-205ENST00000395292 SOGA1O94964 1423 aa14.42□□□□□ -0.1
CELF1-205ENST00000395292 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
CELF1-205ENST00000395292 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
CELF1-205ENST00000395292 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
CELF1-205ENST00000395292 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
CELF1-205ENST00000395292 HRCP23327 699 aa14.33□□□□□ -0.11
CELF1-205ENST00000395292 EEA1Q15075 1411 aa14.33□□□□□ -0.12
CELF1-205ENST00000395292 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
CELF1-205ENST00000395292 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
CELF1-205ENST00000395292 CFTRP13569 1480 aa14.22□□□□□ -0.13
CELF1-205ENST00000395292 TOP2BQ02880 1626 aa14.22□□□□□ -0.13
CELF1-205ENST00000395292 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
CELF1-205ENST00000395292 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
CELF1-205ENST00000395292 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.14
CELF1-205ENST00000395292 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
CELF1-205ENST00000395292 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
CELF1-205ENST00000395292 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
CELF1-205ENST00000395292 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
CELF1-205ENST00000395292 CUX1P39880 1505 aa14.15□□□□□ -0.14
CELF1-205ENST00000395292 KIF21BO75037 1637 aa14.13□□□□□ -0.15
CELF1-205ENST00000395292 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
CELF1-205ENST00000395292 RAPGEF2Q9Y4G8 1499 aa14.09□□□□□ -0.15
CELF1-205ENST00000395292 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
CELF1-205ENST00000395292 CLIP1P30622 1438 aa14.03□□□□□ -0.16
CELF1-205ENST00000395292 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.16
CELF1-205ENST00000395292 KIF27Q86VH2 1401 aa14.02□□□□□ -0.17
CELF1-205ENST00000395292 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
CELF1-205ENST00000395292 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
CELF1-205ENST00000395292 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
CELF1-205ENST00000395292 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
CELF1-205ENST00000395292 NESP48681 1621 aa13.96□□□□□ -0.17
CELF1-205ENST00000395292 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
CELF1-205ENST00000395292 CUX2O14529 1486 aa13.94□□□□□ -0.18
CELF1-205ENST00000395292 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
CELF1-205ENST00000395292 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
CELF1-205ENST00000395292 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
CELF1-205ENST00000395292 IGF1RP08069 1367 aa13.89□□□□□ -0.19
CELF1-205ENST00000395292 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
CELF1-205ENST00000395292 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
CELF1-205ENST00000395292 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
CELF1-205ENST00000395292 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
CELF1-205ENST00000395292 APLP2Q06481 763 aa13.83□□□□□ -0.19
CELF1-205ENST00000395292 ARAP1Q96P48 1450 aa13.83□□□□□ -0.19
CELF1-205ENST00000395292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
CELF1-205ENST00000395292 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
CELF1-205ENST00000395292 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
CELF1-205ENST00000395292 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
CELF1-205ENST00000395292 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
CELF1-205ENST00000395292 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
CELF1-205ENST00000395292 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
CELF1-205ENST00000395292 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
CELF1-205ENST00000395292 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
CELF1-205ENST00000395292 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
CELF1-205ENST00000395292 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
CELF1-205ENST00000395292 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
CELF1-205ENST00000395292 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
CELF1-205ENST00000395292 CUL7Q14999 1698 aa13.65□□□□□ -0.22
CELF1-205ENST00000395292 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
CELF1-205ENST00000395292 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
CELF1-205ENST00000395292 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
CELF1-205ENST00000395292 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
CELF1-205ENST00000395292 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
CELF1-205ENST00000395292 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms