RNA–Protein interactions for RNA: ENST00000361904.7

CELF1-203, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CELF1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-203ENST00000361904 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
CELF1-203ENST00000361904 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
CELF1-203ENST00000361904 ABCC9O60706 1549 aa22.35■■□□□ 1.17
CELF1-203ENST00000361904 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
CELF1-203ENST00000361904 NACADO15069 1562 aa21.52■■□□□ 1.04
CELF1-203ENST00000361904 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
CELF1-203ENST00000361904 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
CELF1-203ENST00000361904 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
CELF1-203ENST00000361904 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
CELF1-203ENST00000361904 UNC13AQ9UPW8 1703 aa21.08■□□□□ 0.97
CELF1-203ENST00000361904 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
CELF1-203ENST00000361904 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
CELF1-203ENST00000361904 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.92
CELF1-203ENST00000361904 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
CELF1-203ENST00000361904 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
CELF1-203ENST00000361904 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.85
CELF1-203ENST00000361904 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
CELF1-203ENST00000361904 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
CELF1-203ENST00000361904 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
CELF1-203ENST00000361904 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
CELF1-203ENST00000361904 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
CELF1-203ENST00000361904 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.77
CELF1-203ENST00000361904 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
CELF1-203ENST00000361904 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
CELF1-203ENST00000361904 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
CELF1-203ENST00000361904 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
CELF1-203ENST00000361904 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
CELF1-203ENST00000361904 WIZO95785 1651 aa19.61■□□□□ 0.73
CELF1-203ENST00000361904 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
CELF1-203ENST00000361904 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
CELF1-203ENST00000361904 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
CELF1-203ENST00000361904 NESP48681 1621 aa19.33■□□□□ 0.68
CELF1-203ENST00000361904 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
CELF1-203ENST00000361904 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
CELF1-203ENST00000361904 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
CELF1-203ENST00000361904 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
CELF1-203ENST00000361904 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.65
CELF1-203ENST00000361904 CFTRP13569 1480 aa19.13■□□□□ 0.65
CELF1-203ENST00000361904 CUX2O14529 1486 aa19.1■□□□□ 0.65
CELF1-203ENST00000361904 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
CELF1-203ENST00000361904 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
CELF1-203ENST00000361904 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CELF1-203ENST00000361904 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
CELF1-203ENST00000361904 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
CELF1-203ENST00000361904 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
CELF1-203ENST00000361904 WDR62O43379 1518 aa18.94■□□□□ 0.62
CELF1-203ENST00000361904 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
CELF1-203ENST00000361904 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
CELF1-203ENST00000361904 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
CELF1-203ENST00000361904 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
CELF1-203ENST00000361904 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
CELF1-203ENST00000361904 CUX1P39880 1505 aa18.58■□□□□ 0.56
CELF1-203ENST00000361904 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
CELF1-203ENST00000361904 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
CELF1-203ENST00000361904 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
CELF1-203ENST00000361904 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
CELF1-203ENST00000361904 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
CELF1-203ENST00000361904 SOGA1O94964 1423 aa18.47■□□□□ 0.55
CELF1-203ENST00000361904 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
CELF1-203ENST00000361904 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
CELF1-203ENST00000361904 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
CELF1-203ENST00000361904 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
CELF1-203ENST00000361904 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
CELF1-203ENST00000361904 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
CELF1-203ENST00000361904 DNAJC5Q9H3Z4 198 aa18.43■□□□□ 0.54
CELF1-203ENST00000361904 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.532e-7■■■■□ 26.1
CELF1-203ENST00000361904 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
CELF1-203ENST00000361904 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
CELF1-203ENST00000361904 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
CELF1-203ENST00000361904 PBRM1Q86U86 1689 aa18.3■□□□□ 0.52
CELF1-203ENST00000361904 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
CELF1-203ENST00000361904 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
CELF1-203ENST00000361904 CHD1O14646 1710 aa18.27■□□□□ 0.51
CELF1-203ENST00000361904 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
CELF1-203ENST00000361904 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
CELF1-203ENST00000361904 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
CELF1-203ENST00000361904 FBLN2P98095 1184 aa18.17■□□□□ 0.5
CELF1-203ENST00000361904 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
CELF1-203ENST00000361904 ERICH3Q5RHP9 1530 aa18.15■□□□□ 0.5
CELF1-203ENST00000361904 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
CELF1-203ENST00000361904 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
CELF1-203ENST00000361904 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
CELF1-203ENST00000361904 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
CELF1-203ENST00000361904 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
CELF1-203ENST00000361904 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
CELF1-203ENST00000361904 CUL7Q14999 1698 aa18.02■□□□□ 0.48
CELF1-203ENST00000361904 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
CELF1-203ENST00000361904 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
CELF1-203ENST00000361904 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
CELF1-203ENST00000361904 TRIM41Q8WV44 630 aa18■□□□□ 0.47
CELF1-203ENST00000361904 ARHGEF11O15085 1522 aa18■□□□□ 0.47
CELF1-203ENST00000361904 IGF1RP08069 1367 aa17.96■□□□□ 0.47
CELF1-203ENST00000361904 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
CELF1-203ENST00000361904 NUP160Q12769 1436 aa17.96■□□□□ 0.46
CELF1-203ENST00000361904 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
CELF1-203ENST00000361904 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
CELF1-203ENST00000361904 SHROOM2Q13796 1616 aa17.85■□□□□ 0.45
CELF1-203ENST00000361904 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
CELF1-203ENST00000361904 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
CELF1-203ENST00000361904 KIAA0586Q9BVV6 1533 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms