RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 PELP1Q8IZL8 1130 aaKnown RBP30.59■■■□□ 2.49
ARID1A-201ENST00000324856 MYT1Q01538 1121 aa29.84■■■□□ 2.37
ARID1A-201ENST00000324856 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.25
ARID1A-201ENST00000324856 CCER1Q8TC90 406 aaPredicted RBP29.03■■■□□ 2.24
ARID1A-201ENST00000324856 ERICH6Q7L0X2 663 aa28.9■■■□□ 2.22
ARID1A-201ENST00000324856 CENPBP07199 599 aaPredicted RBP28.76■■■□□ 2.19
ARID1A-201ENST00000324856 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
ARID1A-201ENST00000324856 ZEB1P37275 1124 aaPredicted RBP28.33■■■□□ 2.13
ARID1A-201ENST00000324856 APLP2Q06481 763 aa28.18■■■□□ 2.1
ARID1A-201ENST00000324856 YTHDC1Q96MU7 727 aaKnown RBP28.12■■■□□ 2.09
ARID1A-201ENST00000324856 NEFLP07196 543 aa27.99■■■□□ 2.07
ARID1A-201ENST00000324856 PCGF6Q9BYE7 350 aa27.86■■■□□ 2.05
ARID1A-201ENST00000324856 TTBK1Q5TCY1 1321 aaPredicted RBP27.84■■■□□ 2.05
ARID1A-201ENST00000324856 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
ARID1A-201ENST00000324856 DAXXQ9UER7 740 aaPredicted RBP27.48■■□□□ 1.99
ARID1A-201ENST00000324856 EHMT2Q96KQ7 1210 aa27.48■■□□□ 1.99
ARID1A-201ENST00000324856 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
ARID1A-201ENST00000324856 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
ARID1A-201ENST00000324856 RTL5Q5HYW3 569 aaPredicted RBP27.07■■□□□ 1.92
ARID1A-201ENST00000324856 ZNF316A6NFI3 1004 aaPredicted RBP26.74■■□□□ 1.87
ARID1A-201ENST00000324856 HRCP23327 699 aa26.7■■□□□ 1.87
ARID1A-201ENST00000324856 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
ARID1A-201ENST00000324856 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
ARID1A-201ENST00000324856 GLIPR1L2Q4G1C9 344 aa26.39■■□□□ 1.82
ARID1A-201ENST00000324856 UBTFP17480 764 aaKnown RBP26.38■■□□□ 1.81
ARID1A-201ENST00000324856 ATP1B4Q9UN42 357 aaPredicted RBP26.27■■□□□ 1.8
ARID1A-201ENST00000324856 CLSPNQ9HAW4 1339 aa26.25■■□□□ 1.79
ARID1A-201ENST00000324856 DIEXFQ68CQ4 756 aaKnown RBP26.2■■□□□ 1.78
ARID1A-201ENST00000324856 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
ARID1A-201ENST00000324856 MYT1LQ9UL68 1186 aa26.13■■□□□ 1.77
ARID1A-201ENST00000324856 CDK11AQ9UQ88 783 aaPredicted RBP26.09■■□□□ 1.77
ARID1A-201ENST00000324856 GTF3C3Q9Y5Q9 886 aa25.91■■□□□ 1.74
ARID1A-201ENST00000324856 ANP32AP39687 249 aaKnown RBP25.86■■□□□ 1.73
ARID1A-201ENST00000324856 EIF5BO60841 1220 aaKnown RBP25.84■■□□□ 1.73
ARID1A-201ENST00000324856 ANP32BQ92688 251 aaKnown RBP25.83■■□□□ 1.73
ARID1A-201ENST00000324856 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
ARID1A-201ENST00000324856 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
ARID1A-201ENST00000324856 ZBTB47Q9UFB7 747 aaPredicted RBP25.65■■□□□ 1.7
ARID1A-201ENST00000324856 ANP32CO43423 234 aa25.54■■□□□ 1.68
ARID1A-201ENST00000324856 ITGAEP38570 1179 aa25.5■■□□□ 1.67
ARID1A-201ENST00000324856 ACIN1Q9UKV3 1341 aaKnown RBP25.5■■□□□ 1.67
ARID1A-201ENST00000324856 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
ARID1A-201ENST00000324856 BCANQ96GW7 911 aa25.46■■□□□ 1.67
ARID1A-201ENST00000324856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
ARID1A-201ENST00000324856 SLC4A1APQ9BWU0 796 aaKnown RBP25.36■■□□□ 1.65
ARID1A-201ENST00000324856 CNGB1Q14028 1251 aaPredicted RBP25.35■■□□□ 1.65
ARID1A-201ENST00000324856 UPF2Q9HAU5 1272 aaKnown RBP25.28■■□□□ 1.64
ARID1A-201ENST00000324856 CANXP27824 592 aaKnown RBP25.27■■□□□ 1.64
ARID1A-201ENST00000324856 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
ARID1A-201ENST00000324856 HSP90AA1P07900 732 aaKnown RBP25.25■■□□□ 1.63
ARID1A-201ENST00000324856 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
ARID1A-201ENST00000324856 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
ARID1A-201ENST00000324856 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
ARID1A-201ENST00000324856 ANP32EQ9BTT0 268 aa25.04■■□□□ 1.6
ARID1A-201ENST00000324856 NEFMP07197 916 aa25.03■■□□□ 1.6
ARID1A-201ENST00000324856 NBR1Q14596 966 aa24.94■■□□□ 1.58
ARID1A-201ENST00000324856 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
ARID1A-201ENST00000324856 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
ARID1A-201ENST00000324856 FKBP8Q14318 412 aa24.88■■□□□ 1.57
ARID1A-201ENST00000324856 TRIM44Q96DX7 344 aaPredicted RBP24.88■■□□□ 1.57
ARID1A-201ENST00000324856 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
ARID1A-201ENST00000324856 ERICH6BQ5W0A0 696 aa24.8■■□□□ 1.56
ARID1A-201ENST00000324856 DDRGK1Q96HY6 314 aa24.74■■□□□ 1.55
ARID1A-201ENST00000324856 NCLP19338 710 aaKnown RBP24.74■■□□□ 1.55
ARID1A-201ENST00000324856 CDK11BP21127 795 aaKnown RBP24.74■■□□□ 1.55
ARID1A-201ENST00000324856 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.71■■□□□ 1.55
ARID1A-201ENST00000324856 CCDC136Q96JN2 1154 aa24.71■■□□□ 1.55
ARID1A-201ENST00000324856 BECN1Q14457 450 aa24.7■■□□□ 1.54
ARID1A-201ENST00000324856 BCL11AQ9H165 835 aa24.63■■□□□ 1.53
ARID1A-201ENST00000324856 GOLGA6L22H0YM25 854 aa24.61■■□□□ 1.53
ARID1A-201ENST00000324856 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
ARID1A-201ENST00000324856 HNRNPUQ00839 825 aaKnown RBP eCLIP24.58■■□□□ 1.53
ARID1A-201ENST00000324856 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
ARID1A-201ENST00000324856 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
ARID1A-201ENST00000324856 ARXQ96QS3 562 aa24.55■■□□□ 1.52
ARID1A-201ENST00000324856 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
ARID1A-201ENST00000324856 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
ARID1A-201ENST00000324856 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
ARID1A-201ENST00000324856 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
ARID1A-201ENST00000324856 DNTTIP2Q5QJE6 756 aaKnown RBP24.42■■□□□ 1.5
ARID1A-201ENST00000324856 NAP1L5Q96NT1 182 aaPredicted RBP24.42■■□□□ 1.5
ARID1A-201ENST00000324856 PTMAP06454 111 aaKnown RBP24.36■■□□□ 1.49
ARID1A-201ENST00000324856 MYH16Q9H6N6 1097 aa24.35■■□□□ 1.49
ARID1A-201ENST00000324856 TMC1Q8TDI8 760 aa24.3■■□□□ 1.48
ARID1A-201ENST00000324856 ZRSR1Q15695 479 aaKnown RBP24.29■■□□□ 1.48
ARID1A-201ENST00000324856 CHAF1AQ13111 956 aaPredicted RBP24.29■■□□□ 1.48
ARID1A-201ENST00000324856 FAM9BQ8IZU0 186 aa24.25■■□□□ 1.47
ARID1A-201ENST00000324856 GOLGA6L6A8MZA4 724 aa24.22■■□□□ 1.47
ARID1A-201ENST00000324856 NRDCO43847 1150 aa24.2■■□□□ 1.46
ARID1A-201ENST00000324856 NOP58Q9Y2X3 529 aaKnown RBP24.15■■□□□ 1.46
ARID1A-201ENST00000324856 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.46
ARID1A-201ENST00000324856 DDX10Q13206 875 aaKnown RBP24.14■■□□□ 1.45
ARID1A-201ENST00000324856 CASC1Q6TDU7 716 aa24.13■■□□□ 1.45
ARID1A-201ENST00000324856 L1TD1Q5T7N2 865 aaKnown RBP24.12■■□□□ 1.45
ARID1A-201ENST00000324856 MSNP26038 577 aaKnown RBP24.09■■□□□ 1.45
ARID1A-201ENST00000324856 MRS2Q9HD23 443 aa24.07■■□□□ 1.44
ARID1A-201ENST00000324856 RTN4Q9NQC3 1192 aaKnown RBP24.02■■□□□ 1.44
ARID1A-201ENST00000324856 MIER1Q8N108 512 aa23.92■■□□□ 1.42
ARID1A-201ENST00000324856 DEKP35659 375 aaKnown RBP23.91■■□□□ 1.42
ARID1A-201ENST00000324856 PTMSP20962 102 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms