Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 NUMB-213ENST00000554818 552 ntTSL 319.72■□□□□ 0.752e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-217ENST00000583210 512 ntTSL 419.7■□□□□ 0.741e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC19.34■□□□□ 0.691e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-215ENST00000555307 1039 ntTSL 517.88■□□□□ 0.452e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC17.66■□□□□ 0.421e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-209ENST00000554315 1740 ntTSL 1 (best)17.61■□□□□ 0.412e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-225ENST00000557031 567 ntTSL 415.99■□□□□ 0.152e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-230ENST00000557774 847 ntTSL 215.78■□□□□ 0.122e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-208ENST00000579537 372 ntTSL 415.5■□□□□ 0.071e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC15.49■□□□□ 0.071e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC14.75□□□□□ -0.051e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.062e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-222ENST00000556700 529 ntTSL 414.53□□□□□ -0.082e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-206ENST00000553415 694 ntTSL 413.18□□□□□ -0.32e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-210ENST00000554394 954 ntTSL 311.13□□□□□ -0.632e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.732e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.892e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-220ENST00000556112 568 ntTSL 45.47□□□□□ -1.532e-6■■■■□ 20.6
HNRNPUQ00839 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 22e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.912e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.892e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.92e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.732e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-214ENST00000491207 469 ntTSL 418.52■□□□□ 0.562e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.332e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-211ENST00000482037 603 ntTSL 516.02■□□□□ 0.162e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-212ENST00000482872 839 ntTSL 514.92□□□□□ -0.022e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-215ENST00000495241 794 ntTSL 214.29□□□□□ -0.122e-6■■■■□ 20.5
HNRNPUQ00839 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.32■■□□□ 1.82e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC21.45■■□□□ 1.022e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.92e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-223ENST00000588516 1304 ntTSL 519.25■□□□□ 0.672e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)15.73■□□□□ 0.112e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-233ENST00000591989 233 ntTSL 315.56■□□□□ 0.082e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC13.35□□□□□ -0.272e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC11.35□□□□□ -0.592e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-231ENST00000590694 165 ntTSL 57.91□□□□□ -1.142e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-211ENST00000585363 241 ntTSL 56.99□□□□□ -1.292e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-236ENST00000592846 484 ntTSL 46.15□□□□□ -1.422e-6■■■■□ 20.4
HNRNPUQ00839 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.055e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-204ENST00000451533 562 ntTSL 412.89□□□□□ -0.355e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-205ENST00000457525 576 ntTSL 39.06□□□□□ -0.965e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.235e-6■■■■□ 20.3
HNRNPUQ00839 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.01□□□□□ -0.976e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-207ENST00000515020 340 ntTSL 231.19■■■□□ 2.586e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-203ENST00000506628 520 ntTSL 526.48■■□□□ 1.836e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-206ENST00000513343 582 ntTSL 324.94■■□□□ 1.586e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.486e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-208ENST00000635633 467 ntTSL 36.5□□□□□ -1.376e-7■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-212ENST00000587905 743 ntTSL 526.16■■□□□ 1.783e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-211ENST00000476994 591 ntTSL 223.2■■□□□ 1.33e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-206ENST00000423161 1058 ntTSL 322.82■■□□□ 1.243e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-222ENST00000583732 580 ntTSL 418.57■□□□□ 0.563e-6■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC17.98■□□□□ 0.473e-6■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.333e-6■■■■□ 20.1
HNRNPUQ00839 WWC2-207ENST00000508614 604 ntTSL 321.6■■□□□ 1.053e-6■■■■□ 20
HNRNPUQ00839 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.683e-6■■■■□ 20
HNRNPUQ00839 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.663e-6■■■■□ 20
HNRNPUQ00839 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC16.88■□□□□ 0.293e-6■■■■□ 20
HNRNPUQ00839 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC14.91□□□□□ -0.023e-6■■■■□ 20
HNRNPUQ00839 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.54■□□□□ 0.568e-7■■■■□ 19.9
HNRNPUQ00839 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.078e-7■■■■□ 19.9
HNRNPUQ00839 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.614e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-204ENST00000421787 1924 ntTSL 228.03■■■□□ 2.084e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.39■■□□□ 1.824e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.89■■□□□ 1.574e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-201ENST00000028008 1220 ntTSL 523.94■■□□□ 1.424e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.77■■□□□ 1.44e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-207ENST00000478180 963 ntTSL 523.11■■□□□ 1.294e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-202ENST00000358165 2445 ntTSL 222.71■■□□□ 1.234e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.114e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-209ENST00000499370 2164 ntTSL 215.25■□□□□ 0.034e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-208ENST00000496851 881 ntTSL 513.33□□□□□ -0.284e-6■■■■□ 19.9
HNRNPUQ00839 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.864e-9■■■■□ 19.9
HNRNPUQ00839 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.93■■□□□ 1.97e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-203ENST00000503596 1589 ntTSL 526.09■■□□□ 1.777e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.767e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.657e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.93■■□□□ 1.587e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-208ENST00000509676 1178 ntTSL 520.58■□□□□ 0.897e-7■■■■□ 19.8
HNRNPUQ00839 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.976e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.056e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC14.32□□□□□ -0.126e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-206ENST00000513048 994 ntTSL 1 (best)12.51□□□□□ -0.416e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC10.84□□□□□ -0.676e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-204ENST00000508282 545 ntTSL 38.96□□□□□ -0.986e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-207ENST00000513314 582 ntTSL 38.16□□□□□ -1.16e-6■■■■□ 19.8
HNRNPUQ00839 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC35.73■■■■□ 3.312e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.212e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC27.44■■□□□ 1.982e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.772e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.362e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.332e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.22■□□□□ 0.992e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC11.69□□□□□ -0.542e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-205ENST00000526594 785 ntTSL 38.03□□□□□ -1.122e-11■■■■□ 19.7
Retrieved 100 of 2,288 protein–RNA pairs in 29 ms