RNA–Protein interactions for RNA: ENST00000553415.5

NUMB-206, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 694 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-206ENST00000553415 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
NUMB-206ENST00000553415 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
NUMB-206ENST00000553415 ABCC9O60706 1549 aa22.47■■□□□ 1.19
NUMB-206ENST00000553415 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
NUMB-206ENST00000553415 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.02
NUMB-206ENST00000553415 NACADO15069 1562 aa21.38■■□□□ 1.01
NUMB-206ENST00000553415 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
NUMB-206ENST00000553415 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
NUMB-206ENST00000553415 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
NUMB-206ENST00000553415 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
NUMB-206ENST00000553415 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
NUMB-206ENST00000553415 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
NUMB-206ENST00000553415 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
NUMB-206ENST00000553415 SCRIBQ14160 1630 aa20.64■□□□□ 0.89
NUMB-206ENST00000553415 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
NUMB-206ENST00000553415 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
NUMB-206ENST00000553415 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
NUMB-206ENST00000553415 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
NUMB-206ENST00000553415 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
NUMB-206ENST00000553415 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
NUMB-206ENST00000553415 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
NUMB-206ENST00000553415 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
NUMB-206ENST00000553415 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
NUMB-206ENST00000553415 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
NUMB-206ENST00000553415 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
NUMB-206ENST00000553415 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
NUMB-206ENST00000553415 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
NUMB-206ENST00000553415 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
NUMB-206ENST00000553415 NESP48681 1621 aa19.36■□□□□ 0.69
NUMB-206ENST00000553415 WIZO95785 1651 aa19.3■□□□□ 0.68
NUMB-206ENST00000553415 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
NUMB-206ENST00000553415 CUX2O14529 1486 aa19.26■□□□□ 0.67
NUMB-206ENST00000553415 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
NUMB-206ENST00000553415 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
NUMB-206ENST00000553415 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
NUMB-206ENST00000553415 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
NUMB-206ENST00000553415 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
NUMB-206ENST00000553415 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
NUMB-206ENST00000553415 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
NUMB-206ENST00000553415 CFTRP13569 1480 aa19.01■□□□□ 0.63
NUMB-206ENST00000553415 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
NUMB-206ENST00000553415 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
NUMB-206ENST00000553415 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
NUMB-206ENST00000553415 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
NUMB-206ENST00000553415 WDR62O43379 1518 aa18.88■□□□□ 0.61
NUMB-206ENST00000553415 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
NUMB-206ENST00000553415 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
NUMB-206ENST00000553415 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
NUMB-206ENST00000553415 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
NUMB-206ENST00000553415 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
NUMB-206ENST00000553415 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
NUMB-206ENST00000553415 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
NUMB-206ENST00000553415 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
NUMB-206ENST00000553415 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
NUMB-206ENST00000553415 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
NUMB-206ENST00000553415 SOGA1O94964 1423 aa18.41■□□□□ 0.54
NUMB-206ENST00000553415 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
NUMB-206ENST00000553415 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
NUMB-206ENST00000553415 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
NUMB-206ENST00000553415 CUX1P39880 1505 aa18.36■□□□□ 0.53
NUMB-206ENST00000553415 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
NUMB-206ENST00000553415 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
NUMB-206ENST00000553415 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
NUMB-206ENST00000553415 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
NUMB-206ENST00000553415 FBLN2P98095 1184 aa18.29■□□□□ 0.52
NUMB-206ENST00000553415 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
NUMB-206ENST00000553415 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
NUMB-206ENST00000553415 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
NUMB-206ENST00000553415 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
NUMB-206ENST00000553415 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
NUMB-206ENST00000553415 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
NUMB-206ENST00000553415 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
NUMB-206ENST00000553415 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
NUMB-206ENST00000553415 CHD1O14646 1710 aa18.12■□□□□ 0.49
NUMB-206ENST00000553415 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
NUMB-206ENST00000553415 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
NUMB-206ENST00000553415 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
NUMB-206ENST00000553415 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
NUMB-206ENST00000553415 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
NUMB-206ENST00000553415 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
NUMB-206ENST00000553415 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
NUMB-206ENST00000553415 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
NUMB-206ENST00000553415 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
NUMB-206ENST00000553415 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
NUMB-206ENST00000553415 PBRM1Q86U86 1689 aa18■□□□□ 0.47
NUMB-206ENST00000553415 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
NUMB-206ENST00000553415 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
NUMB-206ENST00000553415 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
NUMB-206ENST00000553415 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
NUMB-206ENST00000553415 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
NUMB-206ENST00000553415 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
NUMB-206ENST00000553415 NUP160Q12769 1436 aa17.88■□□□□ 0.45
NUMB-206ENST00000553415 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
NUMB-206ENST00000553415 IGF1RP08069 1367 aa17.84■□□□□ 0.45
NUMB-206ENST00000553415 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
NUMB-206ENST00000553415 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
NUMB-206ENST00000553415 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
NUMB-206ENST00000553415 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
NUMB-206ENST00000553415 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
NUMB-206ENST00000553415 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms