RNA–Protein interactions for RNA: ENST00000555307.5

NUMB-215, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 5

Gene NUMB, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-215ENST00000555307 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
NUMB-215ENST00000555307 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
NUMB-215ENST00000555307 ABCC9O60706 1549 aa29.31■■■□□ 2.28
NUMB-215ENST00000555307 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
NUMB-215ENST00000555307 NACADO15069 1562 aa28.24■■■□□ 2.11
NUMB-215ENST00000555307 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
NUMB-215ENST00000555307 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
NUMB-215ENST00000555307 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
NUMB-215ENST00000555307 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
NUMB-215ENST00000555307 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
NUMB-215ENST00000555307 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
NUMB-215ENST00000555307 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
NUMB-215ENST00000555307 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
NUMB-215ENST00000555307 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
NUMB-215ENST00000555307 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
NUMB-215ENST00000555307 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
NUMB-215ENST00000555307 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
NUMB-215ENST00000555307 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
NUMB-215ENST00000555307 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
NUMB-215ENST00000555307 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
NUMB-215ENST00000555307 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
NUMB-215ENST00000555307 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
NUMB-215ENST00000555307 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
NUMB-215ENST00000555307 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
NUMB-215ENST00000555307 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
NUMB-215ENST00000555307 NCAPD3P42695 1498 aa26.03■■□□□ 1.76
NUMB-215ENST00000555307 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
NUMB-215ENST00000555307 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
NUMB-215ENST00000555307 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
NUMB-215ENST00000555307 WIZO95785 1651 aa25.84■■□□□ 1.73
NUMB-215ENST00000555307 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
NUMB-215ENST00000555307 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
NUMB-215ENST00000555307 NESP48681 1621 aa25.41■■□□□ 1.66
NUMB-215ENST00000555307 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
NUMB-215ENST00000555307 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
NUMB-215ENST00000555307 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
NUMB-215ENST00000555307 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
NUMB-215ENST00000555307 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
NUMB-215ENST00000555307 CFTRP13569 1480 aa25.15■■□□□ 1.62
NUMB-215ENST00000555307 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
NUMB-215ENST00000555307 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
NUMB-215ENST00000555307 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
NUMB-215ENST00000555307 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
NUMB-215ENST00000555307 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
NUMB-215ENST00000555307 CUX2O14529 1486 aa24.97■■□□□ 1.59
NUMB-215ENST00000555307 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
NUMB-215ENST00000555307 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
NUMB-215ENST00000555307 WDR62O43379 1518 aa24.86■■□□□ 1.57
NUMB-215ENST00000555307 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
NUMB-215ENST00000555307 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
NUMB-215ENST00000555307 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
NUMB-215ENST00000555307 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
NUMB-215ENST00000555307 CUX1P39880 1505 aa24.47■■□□□ 1.51
NUMB-215ENST00000555307 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
NUMB-215ENST00000555307 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
NUMB-215ENST00000555307 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.49
NUMB-215ENST00000555307 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
NUMB-215ENST00000555307 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
NUMB-215ENST00000555307 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
NUMB-215ENST00000555307 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
NUMB-215ENST00000555307 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
NUMB-215ENST00000555307 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
NUMB-215ENST00000555307 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
NUMB-215ENST00000555307 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
NUMB-215ENST00000555307 SOGA1O94964 1423 aa24.27■■□□□ 1.48
NUMB-215ENST00000555307 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
NUMB-215ENST00000555307 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.462e-7■■■■□ 23.8
NUMB-215ENST00000555307 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
NUMB-215ENST00000555307 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
NUMB-215ENST00000555307 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
NUMB-215ENST00000555307 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
NUMB-215ENST00000555307 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
NUMB-215ENST00000555307 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
NUMB-215ENST00000555307 CHD1O14646 1710 aa24.01■■□□□ 1.43
NUMB-215ENST00000555307 GRIN2BQ13224 1484 aa24■■□□□ 1.43
NUMB-215ENST00000555307 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
NUMB-215ENST00000555307 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
NUMB-215ENST00000555307 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
NUMB-215ENST00000555307 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
NUMB-215ENST00000555307 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
NUMB-215ENST00000555307 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
NUMB-215ENST00000555307 FBLN2P98095 1184 aa23.79■■□□□ 1.4
NUMB-215ENST00000555307 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
NUMB-215ENST00000555307 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
NUMB-215ENST00000555307 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
NUMB-215ENST00000555307 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
NUMB-215ENST00000555307 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
NUMB-215ENST00000555307 CUL7Q14999 1698 aa23.69■■□□□ 1.38
NUMB-215ENST00000555307 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
NUMB-215ENST00000555307 IGF1RP08069 1367 aa23.66■■□□□ 1.38
NUMB-215ENST00000555307 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
NUMB-215ENST00000555307 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
NUMB-215ENST00000555307 RIMBP3CA6NJZ7 1639 aa23.61■■□□□ 1.37
NUMB-215ENST00000555307 RIMBP3BA6NNM3 1639 aa23.61■■□□□ 1.37
NUMB-215ENST00000555307 RIMBP3Q9UFD9 1639 aa23.61■■□□□ 1.37
NUMB-215ENST00000555307 NUP160Q12769 1436 aa23.59■■□□□ 1.37
NUMB-215ENST00000555307 ARHGEF11O15085 1522 aa23.58■■□□□ 1.36
NUMB-215ENST00000555307 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
NUMB-215ENST00000555307 SHROOM2Q13796 1616 aa23.47■■□□□ 1.35
NUMB-215ENST00000555307 RAPGEF2Q9Y4G8 1499 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms