RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
NUMB-220ENST00000556112 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
NUMB-220ENST00000556112 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
NUMB-220ENST00000556112 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
NUMB-220ENST00000556112 FOXD1Q16676 465 aa14.1□□□□□ -0.15
NUMB-220ENST00000556112 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
NUMB-220ENST00000556112 ADRA2BP18089 450 aa13.5□□□□□ -0.25
NUMB-220ENST00000556112 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
NUMB-220ENST00000556112 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
NUMB-220ENST00000556112 MSH5O43196 834 aa13.04□□□□□ -0.32
NUMB-220ENST00000556112 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
NUMB-220ENST00000556112 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
NUMB-220ENST00000556112 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
NUMB-220ENST00000556112 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
NUMB-220ENST00000556112 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
NUMB-220ENST00000556112 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
NUMB-220ENST00000556112 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
NUMB-220ENST00000556112 KCNA4P22459 653 aa12.01□□□□□ -0.49
NUMB-220ENST00000556112 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
NUMB-220ENST00000556112 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
NUMB-220ENST00000556112 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
NUMB-220ENST00000556112 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
NUMB-220ENST00000556112 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
NUMB-220ENST00000556112 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
NUMB-220ENST00000556112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
NUMB-220ENST00000556112 SLC4A2P04920 1241 aa11.21□□□□□ -0.61
NUMB-220ENST00000556112 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
NUMB-220ENST00000556112 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
NUMB-220ENST00000556112 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
NUMB-220ENST00000556112 ZBTB22O15209 634 aa11.04□□□□□ -0.64
NUMB-220ENST00000556112 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.65
NUMB-220ENST00000556112 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
NUMB-220ENST00000556112 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
NUMB-220ENST00000556112 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
NUMB-220ENST00000556112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
NUMB-220ENST00000556112 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
NUMB-220ENST00000556112 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
NUMB-220ENST00000556112 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
NUMB-220ENST00000556112 APLP2Q06481 763 aa10.83□□□□□ -0.68
NUMB-220ENST00000556112 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
NUMB-220ENST00000556112 CAPN15O75808 1086 aa10.78□□□□□ -0.68
NUMB-220ENST00000556112 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
NUMB-220ENST00000556112 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
NUMB-220ENST00000556112 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
NUMB-220ENST00000556112 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
NUMB-220ENST00000556112 DSG3P32926 999 aa10.59□□□□□ -0.71
NUMB-220ENST00000556112 ABCB7O75027 752 aa10.57□□□□□ -0.72
NUMB-220ENST00000556112 POLA2Q14181 598 aa10.52□□□□□ -0.73
NUMB-220ENST00000556112 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
NUMB-220ENST00000556112 FBLN2P98095 1184 aa10.25□□□□□ -0.77
NUMB-220ENST00000556112 NISCHQ9Y2I1 1504 aa10.21□□□□□ -0.78
NUMB-220ENST00000556112 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
NUMB-220ENST00000556112 OSCARQ8IYS5 282 aa10.15□□□□□ -0.78
NUMB-220ENST00000556112 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
NUMB-220ENST00000556112 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
NUMB-220ENST00000556112 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
NUMB-220ENST00000556112 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
NUMB-220ENST00000556112 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
NUMB-220ENST00000556112 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.82
NUMB-220ENST00000556112 AKT1S1Q96B36 256 aa9.96□□□□□ -0.82
NUMB-220ENST00000556112 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
NUMB-220ENST00000556112 FKBP8Q14318 412 aa9.89□□□□□ -0.83
NUMB-220ENST00000556112 PABPN1Q86U42 306 aaKnown RBP eCLIP9.86□□□□□ -0.83
NUMB-220ENST00000556112 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
NUMB-220ENST00000556112 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
NUMB-220ENST00000556112 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
NUMB-220ENST00000556112 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
NUMB-220ENST00000556112 PROM2Q8N271 834 aa9.73□□□□□ -0.85
NUMB-220ENST00000556112 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
NUMB-220ENST00000556112 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
NUMB-220ENST00000556112 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
NUMB-220ENST00000556112 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
NUMB-220ENST00000556112 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
NUMB-220ENST00000556112 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
NUMB-220ENST00000556112 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
NUMB-220ENST00000556112 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
NUMB-220ENST00000556112 POTEHQ6S545 545 aa9.51□□□□□ -0.89
NUMB-220ENST00000556112 MIER1Q8N108 512 aa9.47□□□□□ -0.89
NUMB-220ENST00000556112 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
NUMB-220ENST00000556112 PLCD3Q8N3E9 789 aa9.45□□□□□ -0.9
NUMB-220ENST00000556112 PLEKHG5O94827 1062 aa9.43□□□□□ -0.9
NUMB-220ENST00000556112 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
NUMB-220ENST00000556112 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
NUMB-220ENST00000556112 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
NUMB-220ENST00000556112 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
NUMB-220ENST00000556112 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
NUMB-220ENST00000556112 HAX1O00165 279 aa9.32□□□□□ -0.92
NUMB-220ENST00000556112 KLHL34Q8N239 644 aa9.32□□□□□ -0.92
NUMB-220ENST00000556112 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
NUMB-220ENST00000556112 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
NUMB-220ENST00000556112 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
NUMB-220ENST00000556112 EVX2Q03828 476 aa9.21□□□□□ -0.94
NUMB-220ENST00000556112 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
NUMB-220ENST00000556112 NUBP1P53384 320 aa9.2□□□□□ -0.94
NUMB-220ENST00000556112 SPOCK2Q92563 424 aa9.2□□□□□ -0.94
NUMB-220ENST00000556112 RASEFQ8IZ41 740 aa9.19□□□□□ -0.94
NUMB-220ENST00000556112 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
NUMB-220ENST00000556112 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
NUMB-220ENST00000556112 DCAF8Q5TAQ9 597 aa9.14□□□□□ -0.95
NUMB-220ENST00000556112 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms