RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-222ENST00000556700 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
NUMB-222ENST00000556700 ABCC9O60706 1549 aa26.49■■□□□ 1.83
NUMB-222ENST00000556700 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
NUMB-222ENST00000556700 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
NUMB-222ENST00000556700 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
NUMB-222ENST00000556700 NACADO15069 1562 aa24.79■■□□□ 1.56
NUMB-222ENST00000556700 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
NUMB-222ENST00000556700 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
NUMB-222ENST00000556700 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
NUMB-222ENST00000556700 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
NUMB-222ENST00000556700 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
NUMB-222ENST00000556700 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
NUMB-222ENST00000556700 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
NUMB-222ENST00000556700 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
NUMB-222ENST00000556700 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
NUMB-222ENST00000556700 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
NUMB-222ENST00000556700 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
NUMB-222ENST00000556700 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
NUMB-222ENST00000556700 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
NUMB-222ENST00000556700 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
NUMB-222ENST00000556700 CUX2O14529 1486 aa22.95■■□□□ 1.26
NUMB-222ENST00000556700 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
NUMB-222ENST00000556700 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
NUMB-222ENST00000556700 NESP48681 1621 aa22.7■■□□□ 1.22
NUMB-222ENST00000556700 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
NUMB-222ENST00000556700 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
NUMB-222ENST00000556700 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
NUMB-222ENST00000556700 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
NUMB-222ENST00000556700 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
NUMB-222ENST00000556700 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
NUMB-222ENST00000556700 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
NUMB-222ENST00000556700 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
NUMB-222ENST00000556700 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
NUMB-222ENST00000556700 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
NUMB-222ENST00000556700 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
NUMB-222ENST00000556700 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
NUMB-222ENST00000556700 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
NUMB-222ENST00000556700 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
NUMB-222ENST00000556700 WDR62O43379 1518 aa22.1■■□□□ 1.13
NUMB-222ENST00000556700 WIZO95785 1651 aa22.04■■□□□ 1.12
NUMB-222ENST00000556700 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
NUMB-222ENST00000556700 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
NUMB-222ENST00000556700 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
NUMB-222ENST00000556700 CFTRP13569 1480 aa21.9■■□□□ 1.1
NUMB-222ENST00000556700 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
NUMB-222ENST00000556700 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
NUMB-222ENST00000556700 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
NUMB-222ENST00000556700 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
NUMB-222ENST00000556700 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
NUMB-222ENST00000556700 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
NUMB-222ENST00000556700 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
NUMB-222ENST00000556700 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
NUMB-222ENST00000556700 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
NUMB-222ENST00000556700 PRDM2Q13029 1718 aa21.52■■□□□ 1.04
NUMB-222ENST00000556700 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
NUMB-222ENST00000556700 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
NUMB-222ENST00000556700 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
NUMB-222ENST00000556700 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
NUMB-222ENST00000556700 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
NUMB-222ENST00000556700 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
NUMB-222ENST00000556700 TARBP1Q13395 1621 aaKnown RBP21.34■■□□□ 1.01
NUMB-222ENST00000556700 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
NUMB-222ENST00000556700 ARAP1Q96P48 1450 aa21.3■■□□□ 1
NUMB-222ENST00000556700 CHD1O14646 1710 aa21.29■■□□□ 1
NUMB-222ENST00000556700 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
NUMB-222ENST00000556700 FBLN2P98095 1184 aa21.25■□□□□ 0.99
NUMB-222ENST00000556700 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
NUMB-222ENST00000556700 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
NUMB-222ENST00000556700 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
NUMB-222ENST00000556700 SOGA1O94964 1423 aa21.17■□□□□ 0.98
NUMB-222ENST00000556700 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
NUMB-222ENST00000556700 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
NUMB-222ENST00000556700 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
NUMB-222ENST00000556700 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
NUMB-222ENST00000556700 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
NUMB-222ENST00000556700 CUX1P39880 1505 aa21.01■□□□□ 0.95
NUMB-222ENST00000556700 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
NUMB-222ENST00000556700 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
NUMB-222ENST00000556700 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
NUMB-222ENST00000556700 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
NUMB-222ENST00000556700 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
NUMB-222ENST00000556700 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
NUMB-222ENST00000556700 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
NUMB-222ENST00000556700 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
NUMB-222ENST00000556700 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
NUMB-222ENST00000556700 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
NUMB-222ENST00000556700 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
NUMB-222ENST00000556700 NUP160Q12769 1436 aa20.7■□□□□ 0.9
NUMB-222ENST00000556700 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
NUMB-222ENST00000556700 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
NUMB-222ENST00000556700 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
NUMB-222ENST00000556700 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
NUMB-222ENST00000556700 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
NUMB-222ENST00000556700 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
NUMB-222ENST00000556700 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
NUMB-222ENST00000556700 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
NUMB-222ENST00000556700 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
NUMB-222ENST00000556700 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
NUMB-222ENST00000556700 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.87
NUMB-222ENST00000556700 PRG4Q92954 1404 aaPredicted RBP20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms