Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNCGO76070 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNCGO76070 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNCGO76070 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNCGO76070 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNCGO76070 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SNCGO76070 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SNCGO76070 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SNCGO76070 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SNCGO76070 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNCGO76070 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
SNCGO76070 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SNCGO76070 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNCGO76070 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SNCGO76070 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNCGO76070 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNCGO76070 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.89■■□□□ 1.09
SNCGO76070 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.82■■□□□ 1.08
SNCGO76070 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNCGO76070 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNCGO76070 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNCGO76070 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNCGO76070 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.62■■□□□ 1.05
SNCGO76070 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNCGO76070 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.47■■□□□ 1.03
SNCGO76070 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNCGO76070 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNCGO76070 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNCGO76070 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNCGO76070 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC21.32■■□□□ 1
SNCGO76070 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNCGO76070 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNCGO76070 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNCGO76070 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SNCGO76070 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNCGO76070 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNCGO76070 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNCGO76070 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNCGO76070 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNCGO76070 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SNCGO76070 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNCGO76070 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNCGO76070 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNCGO76070 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNCGO76070 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNCGO76070 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNCGO76070 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SNCGO76070 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SNCGO76070 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNCGO76070 HES6-203ENST00000409160 1600 ntTSL 2 BASIC20.64■□□□□ 0.89
SNCGO76070 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNCGO76070 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNCGO76070 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNCGO76070 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNCGO76070 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNCGO76070 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNCGO76070 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.45■□□□□ 0.86
SNCGO76070 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNCGO76070 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNCGO76070 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNCGO76070 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SNCGO76070 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNCGO76070 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNCGO76070 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNCGO76070 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNCGO76070 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.25■□□□□ 0.83
SNCGO76070 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNCGO76070 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNCGO76070 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNCGO76070 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNCGO76070 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNCGO76070 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
SNCGO76070 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNCGO76070 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SNCGO76070 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNCGO76070 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SNCGO76070 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNCGO76070 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNCGO76070 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.1■□□□□ 0.81
SNCGO76070 AL356512.1-201ENST00000607453 1739 ntBASIC20.1■□□□□ 0.81
SNCGO76070 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNCGO76070 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNCGO76070 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SNCGO76070 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SNCGO76070 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNCGO76070 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
SNCGO76070 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNCGO76070 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SNCGO76070 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNCGO76070 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCGO76070 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCGO76070 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNCGO76070 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.89■□□□□ 0.77
SNCGO76070 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNCGO76070 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.88■□□□□ 0.77
SNCGO76070 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.88■□□□□ 0.77
SNCGO76070 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCGO76070 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SNCGO76070 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.85■□□□□ 0.77
SNCGO76070 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms