Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
S4R3C0 DUX4L29-201ENST00000425409 679 ntBASIC19.91■□□□□ 0.78
S4R3C0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S4R3C0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.91■□□□□ 0.78
S4R3C0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
S4R3C0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
S4R3C0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.9■□□□□ 0.78
S4R3C0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.9■□□□□ 0.78
S4R3C0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
S4R3C0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
S4R3C0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
S4R3C0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
S4R3C0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
S4R3C0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.89■□□□□ 0.77
S4R3C0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S4R3C0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S4R3C0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
S4R3C0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S4R3C0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.87■□□□□ 0.77
S4R3C0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
S4R3C0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
S4R3C0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
S4R3C0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.87■□□□□ 0.77
S4R3C0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
S4R3C0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
S4R3C0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.86■□□□□ 0.77
S4R3C0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
S4R3C0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
S4R3C0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
S4R3C0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.84■□□□□ 0.77
S4R3C0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.84■□□□□ 0.77
S4R3C0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
S4R3C0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.84■□□□□ 0.77
S4R3C0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
S4R3C0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
S4R3C0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.83■□□□□ 0.77
S4R3C0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.83■□□□□ 0.77
S4R3C0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
S4R3C0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
S4R3C0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.83■□□□□ 0.77
S4R3C0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
S4R3C0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.83■□□□□ 0.76
S4R3C0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
S4R3C0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
S4R3C0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
S4R3C0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
S4R3C0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
S4R3C0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
S4R3C0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
S4R3C0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
S4R3C0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
S4R3C0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
S4R3C0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.81■□□□□ 0.76
S4R3C0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.81■□□□□ 0.76
S4R3C0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
S4R3C0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.8■□□□□ 0.76
S4R3C0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
S4R3C0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
S4R3C0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
S4R3C0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.79■□□□□ 0.76
S4R3C0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
S4R3C0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S4R3C0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.79■□□□□ 0.76
S4R3C0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.79■□□□□ 0.76
S4R3C0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S4R3C0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S4R3C0 AP002414.2-202ENST00000590929 1450 ntBASIC19.79■□□□□ 0.76
S4R3C0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
S4R3C0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
S4R3C0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
S4R3C0 BX255925.1-201ENST00000566954 1854 ntBASIC19.78■□□□□ 0.76
S4R3C0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
S4R3C0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
S4R3C0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.78■□□□□ 0.76
S4R3C0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
S4R3C0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
S4R3C0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.77■□□□□ 0.76
S4R3C0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
S4R3C0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
S4R3C0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
S4R3C0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
S4R3C0 LINC01003-201ENST00000564834 1764 ntBASIC19.76■□□□□ 0.75
S4R3C0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
S4R3C0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
S4R3C0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.75■□□□□ 0.75
S4R3C0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
S4R3C0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
S4R3C0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
S4R3C0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
S4R3C0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
S4R3C0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
S4R3C0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
S4R3C0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
S4R3C0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
S4R3C0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms