Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.68■■□□□ 1.38
COMMD3-BMI1R4GMX3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
COMMD3-BMI1R4GMX3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.67■■□□□ 1.38
COMMD3-BMI1R4GMX3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.67■■□□□ 1.38
COMMD3-BMI1R4GMX3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.67■■□□□ 1.38
COMMD3-BMI1R4GMX3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COMMD3-BMI1R4GMX3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COMMD3-BMI1R4GMX3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.66■■□□□ 1.38
COMMD3-BMI1R4GMX3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 AC091060.1-201ENST00000623524 1766 ntBASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD3-BMI1R4GMX3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COMMD3-BMI1R4GMX3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.64■■□□□ 1.37
COMMD3-BMI1R4GMX3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
COMMD3-BMI1R4GMX3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
COMMD3-BMI1R4GMX3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 AL133380.1-201ENST00000506013 324 ntBASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 WASH5P-204ENST00000632292 975 ntBASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COMMD3-BMI1R4GMX3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.62■■□□□ 1.37
COMMD3-BMI1R4GMX3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COMMD3-BMI1R4GMX3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
COMMD3-BMI1R4GMX3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COMMD3-BMI1R4GMX3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COMMD3-BMI1R4GMX3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COMMD3-BMI1R4GMX3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.59■■□□□ 1.37
COMMD3-BMI1R4GMX3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COMMD3-BMI1R4GMX3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COMMD3-BMI1R4GMX3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COMMD3-BMI1R4GMX3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
COMMD3-BMI1R4GMX3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COMMD3-BMI1R4GMX3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
COMMD3-BMI1R4GMX3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD3-BMI1R4GMX3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD3-BMI1R4GMX3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COMMD3-BMI1R4GMX3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD3-BMI1R4GMX3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD3-BMI1R4GMX3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COMMD3-BMI1R4GMX3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
COMMD3-BMI1R4GMX3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.55■■□□□ 1.36
COMMD3-BMI1R4GMX3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COMMD3-BMI1R4GMX3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COMMD3-BMI1R4GMX3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COMMD3-BMI1R4GMX3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.54■■□□□ 1.36
COMMD3-BMI1R4GMX3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COMMD3-BMI1R4GMX3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COMMD3-BMI1R4GMX3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COMMD3-BMI1R4GMX3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COMMD3-BMI1R4GMX3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COMMD3-BMI1R4GMX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
COMMD3-BMI1R4GMX3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
COMMD3-BMI1R4GMX3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COMMD3-BMI1R4GMX3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.5■■□□□ 1.35
COMMD3-BMI1R4GMX3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COMMD3-BMI1R4GMX3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
COMMD3-BMI1R4GMX3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
COMMD3-BMI1R4GMX3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
COMMD3-BMI1R4GMX3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.49■■□□□ 1.35
COMMD3-BMI1R4GMX3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COMMD3-BMI1R4GMX3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COMMD3-BMI1R4GMX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.48■■□□□ 1.35
COMMD3-BMI1R4GMX3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD3-BMI1R4GMX3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COMMD3-BMI1R4GMX3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COMMD3-BMI1R4GMX3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COMMD3-BMI1R4GMX3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.46■■□□□ 1.35
COMMD3-BMI1R4GMX3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.45■■□□□ 1.35
COMMD3-BMI1R4GMX3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.45■■□□□ 1.35
COMMD3-BMI1R4GMX3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 AC145676.1-201ENST00000514988 2004 ntBASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COMMD3-BMI1R4GMX3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COMMD3-BMI1R4GMX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COMMD3-BMI1R4GMX3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
COMMD3-BMI1R4GMX3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COMMD3-BMI1R4GMX3 RARRES2P7-201ENST00000567349 469 ntBASIC23.43■■□□□ 1.34
COMMD3-BMI1R4GMX3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COMMD3-BMI1R4GMX3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms