Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HHLA3Q9XRX5 AL449106.1-201ENST00000608517 1980 ntBASIC18.4■□□□□ 0.54
HHLA3Q9XRX5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HHLA3Q9XRX5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HHLA3Q9XRX5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HHLA3Q9XRX5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HHLA3Q9XRX5 AC108673.1-201ENST00000510422 1159 ntBASIC18.39■□□□□ 0.53
HHLA3Q9XRX5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
HHLA3Q9XRX5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HHLA3Q9XRX5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.38■□□□□ 0.53
HHLA3Q9XRX5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HHLA3Q9XRX5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HHLA3Q9XRX5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HHLA3Q9XRX5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HHLA3Q9XRX5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HHLA3Q9XRX5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HHLA3Q9XRX5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.36■□□□□ 0.53
HHLA3Q9XRX5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.36■□□□□ 0.53
HHLA3Q9XRX5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HHLA3Q9XRX5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.35■□□□□ 0.53
HHLA3Q9XRX5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HHLA3Q9XRX5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 AL162393.1-201ENST00000437852 946 ntBASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
HHLA3Q9XRX5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HHLA3Q9XRX5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.33■□□□□ 0.53
HHLA3Q9XRX5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HHLA3Q9XRX5 AC087741.3-201ENST00000624270 1347 ntBASIC18.32■□□□□ 0.52
HHLA3Q9XRX5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.32■□□□□ 0.52
HHLA3Q9XRX5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HHLA3Q9XRX5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HHLA3Q9XRX5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HHLA3Q9XRX5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.31■□□□□ 0.52
HHLA3Q9XRX5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HHLA3Q9XRX5 AC127502.1-201ENST00000399971 1502 ntBASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 AC044849.2-201ENST00000606596 710 ntBASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
HHLA3Q9XRX5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HHLA3Q9XRX5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HHLA3Q9XRX5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HHLA3Q9XRX5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HHLA3Q9XRX5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HHLA3Q9XRX5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HHLA3Q9XRX5 MIR6090-201ENST00000622481 60 ntBASIC18.28■□□□□ 0.52
HHLA3Q9XRX5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HHLA3Q9XRX5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HHLA3Q9XRX5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HHLA3Q9XRX5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.27■□□□□ 0.52
HHLA3Q9XRX5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.27■□□□□ 0.51
HHLA3Q9XRX5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HHLA3Q9XRX5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HHLA3Q9XRX5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 BX255925.1-201ENST00000566954 1854 ntBASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HHLA3Q9XRX5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HHLA3Q9XRX5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 408.1 ms