Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DUX4L20-201ENST00000619712 1269 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L21-201ENST00000622058 1269 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L10-201ENST00000622460 1267 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 DUX4L25-201ENST00000624915 1269 ntBASIC21.24■□□□□ 0.99
GAFA1Q96PS6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAFA1Q96PS6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAFA1Q96PS6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
GAFA1Q96PS6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GAFA1Q96PS6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GAFA1Q96PS6 AC110285.7-201ENST00000624417 1536 ntBASIC21.22■□□□□ 0.99
GAFA1Q96PS6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.22■□□□□ 0.99
GAFA1Q96PS6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GAFA1Q96PS6 AP002414.2-202ENST00000590929 1450 ntBASIC21.2■□□□□ 0.98
GAFA1Q96PS6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.2■□□□□ 0.98
GAFA1Q96PS6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GAFA1Q96PS6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GAFA1Q96PS6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GAFA1Q96PS6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GAFA1Q96PS6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAFA1Q96PS6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAFA1Q96PS6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.19■□□□□ 0.98
GAFA1Q96PS6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 AC142086.6-201ENST00000621154 1765 ntBASIC21.18■□□□□ 0.98
GAFA1Q96PS6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GAFA1Q96PS6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GAFA1Q96PS6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAFA1Q96PS6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAFA1Q96PS6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAFA1Q96PS6 CR559946.2-201ENST00000623684 991 ntBASIC21.16■□□□□ 0.98
GAFA1Q96PS6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GAFA1Q96PS6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAFA1Q96PS6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
GAFA1Q96PS6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.14■□□□□ 0.98
GAFA1Q96PS6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
GAFA1Q96PS6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GAFA1Q96PS6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.13■□□□□ 0.97
GAFA1Q96PS6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 MIR3648-2-201ENST00000581792 180 ntBASIC21.12■□□□□ 0.97
GAFA1Q96PS6 MIR3648-1-201ENST00000615959 180 ntBASIC21.12■□□□□ 0.97
GAFA1Q96PS6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GAFA1Q96PS6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAFA1Q96PS6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAFA1Q96PS6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAFA1Q96PS6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
GAFA1Q96PS6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GAFA1Q96PS6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.09■□□□□ 0.97
GAFA1Q96PS6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GAFA1Q96PS6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GAFA1Q96PS6 AC016575.1-201ENST00000607026 382 ntBASIC21.08■□□□□ 0.97
GAFA1Q96PS6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
GAFA1Q96PS6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GAFA1Q96PS6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.07■□□□□ 0.96
GAFA1Q96PS6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GAFA1Q96PS6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 AC018358.1-201ENST00000631079 1402 ntBASIC21.06■□□□□ 0.96
GAFA1Q96PS6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
GAFA1Q96PS6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
GAFA1Q96PS6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms