Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSBQ8NFR3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSBQ8NFR3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPTSSBQ8NFR3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPTSSBQ8NFR3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms