RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
SYDE2-202ENST00000341460 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
SYDE2-202ENST00000341460 MYT1Q01538 1121 aa28.74■■■□□ 2.19
SYDE2-202ENST00000341460 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
SYDE2-202ENST00000341460 NISCHQ9Y2I1 1504 aa28.07■■■□□ 2.08
SYDE2-202ENST00000341460 ERICH6Q7L0X2 663 aa27.8■■■□□ 2.04
SYDE2-202ENST00000341460 CENPBP07199 599 aaPredicted RBP27.63■■■□□ 2.01
SYDE2-202ENST00000341460 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
SYDE2-202ENST00000341460 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
SYDE2-202ENST00000341460 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
SYDE2-202ENST00000341460 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
SYDE2-202ENST00000341460 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
SYDE2-202ENST00000341460 APLP2Q06481 763 aa27.01■■□□□ 1.91
SYDE2-202ENST00000341460 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
SYDE2-202ENST00000341460 NEFLP07196 543 aa26.7■■□□□ 1.87
SYDE2-202ENST00000341460 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
SYDE2-202ENST00000341460 YTHDC1Q96MU7 727 aaKnown RBP26.52■■□□□ 1.84
SYDE2-202ENST00000341460 HRCP23327 699 aa26.21■■□□□ 1.79
SYDE2-202ENST00000341460 RANGAP1P46060 587 aaPredicted RBP26.12■■□□□ 1.77
SYDE2-202ENST00000341460 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
SYDE2-202ENST00000341460 DAXXQ9UER7 740 aaPredicted RBP26.05■■□□□ 1.76
SYDE2-202ENST00000341460 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
SYDE2-202ENST00000341460 RTL5Q5HYW3 569 aaPredicted RBP25.98■■□□□ 1.75
SYDE2-202ENST00000341460 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
SYDE2-202ENST00000341460 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
SYDE2-202ENST00000341460 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
SYDE2-202ENST00000341460 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
SYDE2-202ENST00000341460 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
SYDE2-202ENST00000341460 DIEXFQ68CQ4 756 aaKnown RBP25.31■■□□□ 1.64
SYDE2-202ENST00000341460 GLIPR1L2Q4G1C9 344 aa25.25■■□□□ 1.63
SYDE2-202ENST00000341460 EIF5BO60841 1220 aaKnown RBP25.25■■□□□ 1.63
SYDE2-202ENST00000341460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
SYDE2-202ENST00000341460 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
SYDE2-202ENST00000341460 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.61
SYDE2-202ENST00000341460 CDK11AQ9UQ88 783 aaPredicted RBP25.07■■□□□ 1.6
SYDE2-202ENST00000341460 BCANQ96GW7 911 aa25.04■■□□□ 1.6
SYDE2-202ENST00000341460 ACIN1Q9UKV3 1341 aaKnown RBP25.03■■□□□ 1.6
SYDE2-202ENST00000341460 POLR3GLQ9BT43 218 aa25.03■■□□□ 1.6
SYDE2-202ENST00000341460 ITGAEP38570 1179 aa25.03■■□□□ 1.6
SYDE2-202ENST00000341460 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
SYDE2-202ENST00000341460 CNGB1Q14028 1251 aaPredicted RBP24.89■■□□□ 1.57
SYDE2-202ENST00000341460 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
SYDE2-202ENST00000341460 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
SYDE2-202ENST00000341460 ANP32AP39687 249 aaKnown RBP24.73■■□□□ 1.55
SYDE2-202ENST00000341460 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
SYDE2-202ENST00000341460 ANP32BQ92688 251 aaKnown RBP24.42■■□□□ 1.5
SYDE2-202ENST00000341460 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
SYDE2-202ENST00000341460 ANP32CO43423 234 aa24.37■■□□□ 1.49
SYDE2-202ENST00000341460 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
SYDE2-202ENST00000341460 ABCC9O60706 1549 aa24.35■■□□□ 1.49
SYDE2-202ENST00000341460 NPM2Q86SE8 214 aaKnown RBP24.34■■□□□ 1.49
SYDE2-202ENST00000341460 TRIM52Q96A61 297 aa24.33■■□□□ 1.49
SYDE2-202ENST00000341460 NBR1Q14596 966 aa24.31■■□□□ 1.48
SYDE2-202ENST00000341460 ANP32EQ9BTT0 268 aa24.3■■□□□ 1.48
SYDE2-202ENST00000341460 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
SYDE2-202ENST00000341460 FKBP8Q14318 412 aa24.24■■□□□ 1.47
SYDE2-202ENST00000341460 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
SYDE2-202ENST00000341460 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
SYDE2-202ENST00000341460 ZBTB47Q9UFB7 747 aaPredicted RBP24.17■■□□□ 1.46
SYDE2-202ENST00000341460 TNNT2P45379 298 aaPredicted RBP24.08■■□□□ 1.45
SYDE2-202ENST00000341460 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
SYDE2-202ENST00000341460 FBLN2P98095 1184 aa23.98■■□□□ 1.43
SYDE2-202ENST00000341460 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
SYDE2-202ENST00000341460 HSP90AA1P07900 732 aaKnown RBP23.89■■□□□ 1.42
SYDE2-202ENST00000341460 ARXQ96QS3 562 aa23.88■■□□□ 1.41
SYDE2-202ENST00000341460 UPF2Q9HAU5 1272 aaKnown RBP23.87■■□□□ 1.41
SYDE2-202ENST00000341460 ERICH6BQ5W0A0 696 aa23.86■■□□□ 1.41
SYDE2-202ENST00000341460 RTN4Q9NQC3 1192 aaKnown RBP23.79■■□□□ 1.4
SYDE2-202ENST00000341460 CDK11BP21127 795 aaKnown RBP23.77■■□□□ 1.4
SYDE2-202ENST00000341460 TRIM44Q96DX7 344 aaPredicted RBP23.77■■□□□ 1.4
SYDE2-202ENST00000341460 NEFMP07197 916 aa23.75■■□□□ 1.39
SYDE2-202ENST00000341460 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
SYDE2-202ENST00000341460 CCDC136Q96JN2 1154 aa23.73■■□□□ 1.39
SYDE2-202ENST00000341460 NAP1L5Q96NT1 182 aaPredicted RBP23.72■■□□□ 1.39
SYDE2-202ENST00000341460 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
SYDE2-202ENST00000341460 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
SYDE2-202ENST00000341460 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
SYDE2-202ENST00000341460 ARID3CA6NKF2 412 aa23.67■■□□□ 1.38
SYDE2-202ENST00000341460 ZNF777Q9ULD5 760 aaPredicted RBP23.63■■□□□ 1.37
SYDE2-202ENST00000341460 DDRGK1Q96HY6 314 aa23.61■■□□□ 1.37
SYDE2-202ENST00000341460 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
SYDE2-202ENST00000341460 NCLP19338 710 aaKnown RBP23.55■■□□□ 1.36
SYDE2-202ENST00000341460 DEKP35659 375 aaKnown RBP23.5■■□□□ 1.35
SYDE2-202ENST00000341460 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
SYDE2-202ENST00000341460 BECN1Q14457 450 aa23.44■■□□□ 1.34
SYDE2-202ENST00000341460 MIER1Q8N108 512 aa23.44■■□□□ 1.34
SYDE2-202ENST00000341460 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
SYDE2-202ENST00000341460 FAM9BQ8IZU0 186 aa23.4■■□□□ 1.34
SYDE2-202ENST00000341460 IRX6P78412 446 aaPredicted RBP23.39■■□□□ 1.34
SYDE2-202ENST00000341460 TONSLQ96HA7 1378 aa23.39■■□□□ 1.33
SYDE2-202ENST00000341460 DNTTIP2Q5QJE6 756 aaKnown RBP23.38■■□□□ 1.33
SYDE2-202ENST00000341460 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.38■■□□□ 1.33
SYDE2-202ENST00000341460 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
SYDE2-202ENST00000341460 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
SYDE2-202ENST00000341460 STAG3Q9UJ98 1225 aa23.34■■□□□ 1.33
SYDE2-202ENST00000341460 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
SYDE2-202ENST00000341460 GOLGA6L22H0YM25 854 aa23.33■■□□□ 1.33
SYDE2-202ENST00000341460 PTMAP06454 111 aaKnown RBP23.33■■□□□ 1.33
SYDE2-202ENST00000341460 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
SYDE2-202ENST00000341460 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms