Protein–RNA interactions for Protein: Q8NES3

LFNG, Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LFNGQ8NES3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LFNGQ8NES3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
LFNGQ8NES3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LFNGQ8NES3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LFNGQ8NES3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LFNGQ8NES3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LFNGQ8NES3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LFNGQ8NES3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LFNGQ8NES3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LFNGQ8NES3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.71■□□□□ 0.91
LFNGQ8NES3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.71■□□□□ 0.91
LFNGQ8NES3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LFNGQ8NES3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LFNGQ8NES3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LFNGQ8NES3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
LFNGQ8NES3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LFNGQ8NES3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.7■□□□□ 0.9
LFNGQ8NES3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LFNGQ8NES3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LFNGQ8NES3 AL162393.1-201ENST00000437852 946 ntBASIC20.7■□□□□ 0.9
LFNGQ8NES3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.7■□□□□ 0.9
LFNGQ8NES3 AL449106.1-201ENST00000608517 1980 ntBASIC20.7■□□□□ 0.9
LFNGQ8NES3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LFNGQ8NES3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.7■□□□□ 0.9
LFNGQ8NES3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.69■□□□□ 0.9
LFNGQ8NES3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LFNGQ8NES3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LFNGQ8NES3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LFNGQ8NES3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LFNGQ8NES3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LFNGQ8NES3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.68■□□□□ 0.9
LFNGQ8NES3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LFNGQ8NES3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.68■□□□□ 0.9
LFNGQ8NES3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.68■□□□□ 0.9
LFNGQ8NES3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LFNGQ8NES3 BX255925.1-201ENST00000566954 1854 ntBASIC20.67■□□□□ 0.9
LFNGQ8NES3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LFNGQ8NES3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LFNGQ8NES3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LFNGQ8NES3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LFNGQ8NES3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LFNGQ8NES3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LFNGQ8NES3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LFNGQ8NES3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LFNGQ8NES3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.65■□□□□ 0.9
LFNGQ8NES3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LFNGQ8NES3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LFNGQ8NES3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.65■□□□□ 0.9
LFNGQ8NES3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LFNGQ8NES3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LFNGQ8NES3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LFNGQ8NES3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LFNGQ8NES3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LFNGQ8NES3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LFNGQ8NES3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LFNGQ8NES3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.62■□□□□ 0.89
LFNGQ8NES3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LFNGQ8NES3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LFNGQ8NES3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LFNGQ8NES3 AC087741.3-201ENST00000624270 1347 ntBASIC20.62■□□□□ 0.89
LFNGQ8NES3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.62■□□□□ 0.89
LFNGQ8NES3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LFNGQ8NES3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LFNGQ8NES3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LFNGQ8NES3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LFNGQ8NES3 AC108673.1-201ENST00000510422 1159 ntBASIC20.6■□□□□ 0.89
LFNGQ8NES3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.6■□□□□ 0.89
LFNGQ8NES3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LFNGQ8NES3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.59■□□□□ 0.89
LFNGQ8NES3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.59■□□□□ 0.89
LFNGQ8NES3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.59■□□□□ 0.89
LFNGQ8NES3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LFNGQ8NES3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LFNGQ8NES3 RPS2P35-201ENST00000443417 897 ntBASIC20.58■□□□□ 0.89
LFNGQ8NES3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LFNGQ8NES3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LFNGQ8NES3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.58■□□□□ 0.88
LFNGQ8NES3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 AC044849.2-201ENST00000606596 710 ntBASIC20.57■□□□□ 0.88
LFNGQ8NES3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LFNGQ8NES3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LFNGQ8NES3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.56■□□□□ 0.88
LFNGQ8NES3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
LFNGQ8NES3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LFNGQ8NES3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.55■□□□□ 0.88
LFNGQ8NES3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LFNGQ8NES3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LFNGQ8NES3 MIR6090-201ENST00000622481 60 ntBASIC20.55■□□□□ 0.88
LFNGQ8NES3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LFNGQ8NES3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LFNGQ8NES3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms