Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF7Q8N684 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.74■■□□□ 1.55
CPSF7Q8N684 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF7Q8N684 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF7Q8N684 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF7Q8N684 AC135731.1-201ENST00000569415 2548 ntBASIC24.72■■□□□ 1.55
CPSF7Q8N684 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF7Q8N684 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CPSF7Q8N684 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF7Q8N684 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF7Q8N684 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF7Q8N684 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.69■■□□□ 1.54
CPSF7Q8N684 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPSF7Q8N684 AC127502.1-201ENST00000399971 1502 ntBASIC24.69■■□□□ 1.54
CPSF7Q8N684 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPSF7Q8N684 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF7Q8N684 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CPSF7Q8N684 AC044849.2-201ENST00000606596 710 ntBASIC24.68■■□□□ 1.54
CPSF7Q8N684 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPSF7Q8N684 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPSF7Q8N684 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.66■■□□□ 1.54
CPSF7Q8N684 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPSF7Q8N684 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF7Q8N684 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF7Q8N684 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.65■■□□□ 1.54
CPSF7Q8N684 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.65■■□□□ 1.54
CPSF7Q8N684 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.64■■□□□ 1.53
CPSF7Q8N684 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CPSF7Q8N684 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CPSF7Q8N684 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.63■■□□□ 1.53
CPSF7Q8N684 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF7Q8N684 AL449106.1-201ENST00000608517 1980 ntBASIC24.62■■□□□ 1.53
CPSF7Q8N684 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF7Q8N684 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CPSF7Q8N684 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
CPSF7Q8N684 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPSF7Q8N684 AC100797.4-201ENST00000631653 1827 ntBASIC24.59■■□□□ 1.53
CPSF7Q8N684 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.59■■□□□ 1.53
CPSF7Q8N684 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.59■■□□□ 1.53
CPSF7Q8N684 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPSF7Q8N684 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CPSF7Q8N684 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF7Q8N684 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF7Q8N684 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CPSF7Q8N684 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CPSF7Q8N684 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 ABHD17AP4-201ENST00000411545 909 ntBASIC24.56■■□□□ 1.52
CPSF7Q8N684 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CPSF7Q8N684 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 AP002414.2-202ENST00000590929 1450 ntBASIC24.54■■□□□ 1.52
CPSF7Q8N684 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CPSF7Q8N684 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF7Q8N684 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF7Q8N684 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms