Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 WDR43-201ENST00000296126 787 ntTSL 54.93□□□□□ -1.621e-22■■□□□ 11.4
ZC3H8Q8N5P1 WDR43-204ENST00000440983 541 ntTSL 44.93□□□□□ -1.621e-22■■□□□ 11.4
ZC3H8Q8N5P1 SNORD92-201ENST00000585078 85 ntBASIC1.09□□□□□ -2.231e-22■■□□□ 11.4
ZC3H8Q8N5P1 EPB41L4A-AS1-202ENST00000427306 1367 ntTSL 223.87■■□□□ 1.417e-24■□□□□ 11.1
ZC3H8Q8N5P1 EPB41L4A-AS1-203ENST00000442823 578 ntTSL 217.31■□□□□ 0.367e-24■□□□□ 11.1
ZC3H8Q8N5P1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.01■□□□□ 0.157e-24■□□□□ 11.1
ZC3H8Q8N5P1 EPB41L4A-AS1-204ENST00000508590 292 ntTSL 315.63■□□□□ 0.097e-24■□□□□ 11.1
ZC3H8Q8N5P1 SNORA13-201ENST00000458790 133 ntBASIC-0.4□□□□□ -2.477e-24■□□□□ 11.1
ZC3H8Q8N5P1 CKAP5-212ENST00000533413 3084 ntTSL 1 (best)6.14□□□□□ -1.438e-11■□□□□ 11.1
ZC3H8Q8N5P1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.71□□□□□ -1.58e-11■□□□□ 11.1
ZC3H8Q8N5P1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.528e-11■□□□□ 11.1
ZC3H8Q8N5P1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.15□□□□□ -1.758e-11■□□□□ 11.1
ZC3H8Q8N5P1 SNORD67-201ENST00000390833 111 ntBASIC3.22□□□□□ -1.898e-11■□□□□ 11.1
ZC3H8Q8N5P1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.92■□□□□ 0.622e-10■□□□□ 11.1
ZC3H8Q8N5P1 TERC-201ENST00000602385 541 ntBASIC17.31■□□□□ 0.362e-10■□□□□ 11.1
ZC3H8Q8N5P1 MT-TM-201ENST00000387377 68 ntBASIC-1.87□□□□□ -2.715e-13■□□□□ 10.9
ZC3H8Q8N5P1 RPL17-210ENST00000581091 573 ntTSL 212.05□□□□□ -0.485e-10■□□□□ 10.9
ZC3H8Q8N5P1 SNORD58A-201ENST00000383875 65 ntBASIC0.84□□□□□ -2.275e-10■□□□□ 10.9
ZC3H8Q8N5P1 RPS8-207ENST00000485390 1115 ntTSL 1 (best)20.75■□□□□ 0.918e-11■□□□□ 10.8
ZC3H8Q8N5P1 RPS8-208ENST00000497035 694 ntTSL 314.98□□□□□ -0.018e-11■□□□□ 10.8
ZC3H8Q8N5P1 RPS8-204ENST00000470475 981 ntTSL 214.75□□□□□ -0.058e-11■□□□□ 10.8
ZC3H8Q8N5P1 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.588e-11■□□□□ 10.8
ZC3H8Q8N5P1 RPS8-201ENST00000372209 685 ntTSL 2 BASIC10.65□□□□□ -0.78e-11■□□□□ 10.8
ZC3H8Q8N5P1 SNORD46-201ENST00000364043 104 ntBASIC7.59□□□□□ -1.198e-11■□□□□ 10.8
ZC3H8Q8N5P1 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.064e-34■□□□□ 10.7
ZC3H8Q8N5P1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.234e-6■□□□□ 10.7
ZC3H8Q8N5P1 GPI-208ENST00000588991 2021 ntTSL 221■□□□□ 0.954e-6■□□□□ 10.7
ZC3H8Q8N5P1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.52■□□□□ 0.074e-6■□□□□ 10.7
ZC3H8Q8N5P1 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.48□□□□□ -1.054e-6■□□□□ 10.7
ZC3H8Q8N5P1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.834e-6■□□□□ 10.7
ZC3H8Q8N5P1 TOP2A-202ENST00000577541 420 ntTSL 23.12□□□□□ -1.914e-6■□□□□ 10.7
ZC3H8Q8N5P1 RPL39-202ENST00000468844 1915 ntTSL 1 (best)17.8■□□□□ 0.449e-10■□□□□ 10.6
ZC3H8Q8N5P1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.499e-10■□□□□ 10.6
ZC3H8Q8N5P1 RPL39-203ENST00000477403 405 ntTSL 34.15□□□□□ -1.759e-10■□□□□ 10.6
ZC3H8Q8N5P1 SNORA69-201ENST00000383895 132 ntBASIC4.04□□□□□ -1.769e-10■□□□□ 10.6
ZC3H8Q8N5P1 SNORD27-201ENST00000363981 72 ntBASIC2.53□□□□□ -26e-26■□□□□ 10.6
ZC3H8Q8N5P1 RPS13-207ENST00000531008 594 ntTSL 26□□□□□ -1.455e-10■□□□□ 10.6
ZC3H8Q8N5P1 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.025e-10■□□□□ 10.6
ZC3H8Q8N5P1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.1□□□□□ -0.152e-13■□□□□ 10.5
ZC3H8Q8N5P1 RPL3-212ENST00000467105 1396 ntTSL 1 (best)14.08□□□□□ -0.162e-13■□□□□ 10.5
ZC3H8Q8N5P1 SNORD83B-201ENST00000386745 93 ntBASIC-0.9□□□□□ -2.552e-13■□□□□ 10.5
ZC3H8Q8N5P1 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.823e-9■□□□□ 10.3
ZC3H8Q8N5P1 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.93e-9■□□□□ 10.3
ZC3H8Q8N5P1 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.24e-10■□□□□ 10.2
ZC3H8Q8N5P1 LRRC75A-AS1-218ENST00000578380 310 ntTSL 321.96■■□□□ 1.116e-8■□□□□ 10.2
ZC3H8Q8N5P1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.59e-6■□□□□ 10.1
ZC3H8Q8N5P1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.34■■□□□ 1.339e-6■□□□□ 10.1
ZC3H8Q8N5P1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.01■□□□□ 0.639e-6■□□□□ 10.1
ZC3H8Q8N5P1 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.269e-6■□□□□ 10.1
ZC3H8Q8N5P1 HBG2-202ENST00000380252 694 ntTSL 3 BASIC10.66□□□□□ -0.77e-7■□□□□ 10
ZC3H8Q8N5P1 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.737e-7■□□□□ 10
ZC3H8Q8N5P1 DDX39B-213ENST00000456976 720 ntTSL 511.58□□□□□ -0.561e-21■□□□□ 9.9
ZC3H8Q8N5P1 DDX39B-204ENST00000418897 583 ntTSL 311.53□□□□□ -0.561e-21■□□□□ 9.9
ZC3H8Q8N5P1 ATP6V1G2-DDX39B-203ENST00000480131 552 ntAPPRIS P1 TSL 411.35□□□□□ -0.591e-21■□□□□ 9.9
ZC3H8Q8N5P1 DDX39B-209ENST00000428450 633 ntTSL 411.15□□□□□ -0.621e-21■□□□□ 9.9
ZC3H8Q8N5P1 DDX39B-205ENST00000419020 583 ntTSL 311.14□□□□□ -0.631e-21■□□□□ 9.9
ZC3H8Q8N5P1 DDX39B-211ENST00000449757 591 ntTSL 310.25□□□□□ -0.771e-21■□□□□ 9.9
ZC3H8Q8N5P1 SNORD84-203ENST00000584275 78 ntBASIC3.86□□□□□ -1.791e-21■□□□□ 9.9
ZC3H8Q8N5P1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.29e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-206ENST00000466550 756 ntTSL 211.13□□□□□ -0.639e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.789e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.89e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.869e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-208ENST00000483765 453 ntTSL 35.72□□□□□ -1.499e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-205ENST00000461690 681 ntTSL 54.95□□□□□ -1.629e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-209ENST00000485756 675 ntTSL 23.73□□□□□ -1.819e-8■□□□□ 9.8
ZC3H8Q8N5P1 RPL21-210ENST00000493317 438 ntTSL 23.11□□□□□ -1.919e-8■□□□□ 9.8
ZC3H8Q8N5P1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.97□□□□□ -1.614e-14■□□□□ 9.7
ZC3H8Q8N5P1 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)11.9□□□□□ -0.52e-47■□□□□ 9.6
ZC3H8Q8N5P1 HSPA8-209ENST00000526862 504 ntTSL 34.6□□□□□ -1.672e-47■□□□□ 9.6
ZC3H8Q8N5P1 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.482e-47■□□□□ 9.6
ZC3H8Q8N5P1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.51■□□□□ 0.873e-18■□□□□ 9.6
ZC3H8Q8N5P1 SNHG6-205ENST00000521399 302 ntTSL 220.15■□□□□ 0.823e-18■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-202ENST00000540297 590 ntTSL 319.96■□□□□ 0.791e-8■□□□□ 9.6
ZC3H8Q8N5P1 SNHG6-204ENST00000521127 560 ntTSL 218.4■□□□□ 0.543e-18■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18■□□□□ 0.471e-8■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-205ENST00000549334 581 ntTSL 417.4■□□□□ 0.381e-8■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.321e-8■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.221e-8■□□□□ 9.6
ZC3H8Q8N5P1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.21■□□□□ 0.193e-18■□□□□ 9.6
ZC3H8Q8N5P1 HSP90B1-203ENST00000548462 3032 ntTSL 212.13□□□□□ -0.471e-8■□□□□ 9.6
ZC3H8Q8N5P1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.85□□□□□ -1.633e-18■□□□□ 9.6
ZC3H8Q8N5P1 SNORD87-201ENST00000364849 89 ntBASIC2.61□□□□□ -1.993e-18■□□□□ 9.6
ZC3H8Q8N5P1 ATP5B-202ENST00000547250 840 ntTSL 59.41□□□□□ -0.92e-8■□□□□ 9
ZC3H8Q8N5P1 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.161e-43■□□□□ 9
ZC3H8Q8N5P1 HBE1-203ENST00000396895 578 ntTSL 55.54□□□□□ -1.524e-9■□□□□ 8.9
ZC3H8Q8N5P1 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.83e-6■□□□□ 8.9
ZC3H8Q8N5P1 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.23□□□□□ -1.253e-6■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-206ENST00000476268 1623 ntTSL 318.38■□□□□ 0.535e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-208ENST00000477613 796 ntTSL 517.56■□□□□ 0.45e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-209ENST00000479992 850 ntTSL 316.15■□□□□ 0.185e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-204ENST00000472481 728 ntTSL 215.39■□□□□ 0.055e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)15.12■□□□□ 0.015e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-202ENST00000467825 660 ntTSL 515.04■□□□□ -05e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-212ENST00000488946 2312 ntTSL 214.27□□□□□ -0.125e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.175e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-210ENST00000484279 794 ntTSL 513.85□□□□□ -0.195e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.85□□□□□ -0.195e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-205ENST00000474171 521 ntTSL 211.24□□□□□ -0.615e-25■□□□□ 8.9
ZC3H8Q8N5P1 RPL13A-207ENST00000476300 619 ntTSL 310.42□□□□□ -0.745e-25■□□□□ 8.9
Retrieved 100 of 950 protein–RNA pairs in 64.7 ms