RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
DDX39B-213ENST00000456976 ABCC9O60706 1549 aa29.09■■■□□ 2.25
DDX39B-213ENST00000456976 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
DDX39B-213ENST00000456976 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
DDX39B-213ENST00000456976 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
DDX39B-213ENST00000456976 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
DDX39B-213ENST00000456976 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
DDX39B-213ENST00000456976 NACADO15069 1562 aa26.75■■□□□ 1.87
DDX39B-213ENST00000456976 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
DDX39B-213ENST00000456976 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
DDX39B-213ENST00000456976 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
DDX39B-213ENST00000456976 UNC13AQ9UPW8 1703 aa26.32■■□□□ 1.8
DDX39B-213ENST00000456976 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
DDX39B-213ENST00000456976 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
DDX39B-213ENST00000456976 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
DDX39B-213ENST00000456976 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
DDX39B-213ENST00000456976 CUX2O14529 1486 aa25.53■■□□□ 1.68
DDX39B-213ENST00000456976 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
DDX39B-213ENST00000456976 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
DDX39B-213ENST00000456976 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
DDX39B-213ENST00000456976 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
DDX39B-213ENST00000456976 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
DDX39B-213ENST00000456976 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
DDX39B-213ENST00000456976 NESP48681 1621 aa24.64■■□□□ 1.53
DDX39B-213ENST00000456976 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
DDX39B-213ENST00000456976 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
DDX39B-213ENST00000456976 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
DDX39B-213ENST00000456976 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
DDX39B-213ENST00000456976 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
DDX39B-213ENST00000456976 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
DDX39B-213ENST00000456976 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
DDX39B-213ENST00000456976 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
DDX39B-213ENST00000456976 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
DDX39B-213ENST00000456976 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
DDX39B-213ENST00000456976 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
DDX39B-213ENST00000456976 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
DDX39B-213ENST00000456976 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
DDX39B-213ENST00000456976 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
DDX39B-213ENST00000456976 WDR62O43379 1518 aa24■■□□□ 1.43
DDX39B-213ENST00000456976 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
DDX39B-213ENST00000456976 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
DDX39B-213ENST00000456976 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
DDX39B-213ENST00000456976 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
DDX39B-213ENST00000456976 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
DDX39B-213ENST00000456976 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
DDX39B-213ENST00000456976 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
DDX39B-213ENST00000456976 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
DDX39B-213ENST00000456976 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
DDX39B-213ENST00000456976 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
DDX39B-213ENST00000456976 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
DDX39B-213ENST00000456976 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
DDX39B-213ENST00000456976 CFTRP13569 1480 aa23.43■■□□□ 1.34
DDX39B-213ENST00000456976 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
DDX39B-213ENST00000456976 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
DDX39B-213ENST00000456976 FBLN2P98095 1184 aa23.33■■□□□ 1.33
DDX39B-213ENST00000456976 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
DDX39B-213ENST00000456976 WIZO95785 1651 aa23.22■■□□□ 1.31
DDX39B-213ENST00000456976 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
DDX39B-213ENST00000456976 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.291e-7■■■■□ 25.7
DDX39B-213ENST00000456976 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
DDX39B-213ENST00000456976 CHD1O14646 1710 aa23.09■■□□□ 1.29
DDX39B-213ENST00000456976 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
DDX39B-213ENST00000456976 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
DDX39B-213ENST00000456976 CHMP7Q8WUX9 453 aaPredicted RBP22.98■■□□□ 1.27
DDX39B-213ENST00000456976 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
DDX39B-213ENST00000456976 CLASP1Q7Z460 1538 aa22.88■■□□□ 1.25
DDX39B-213ENST00000456976 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
DDX39B-213ENST00000456976 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
DDX39B-213ENST00000456976 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
DDX39B-213ENST00000456976 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
DDX39B-213ENST00000456976 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
DDX39B-213ENST00000456976 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
DDX39B-213ENST00000456976 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
DDX39B-213ENST00000456976 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
DDX39B-213ENST00000456976 SOGA1O94964 1423 aa22.75■■□□□ 1.23
DDX39B-213ENST00000456976 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
DDX39B-213ENST00000456976 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
DDX39B-213ENST00000456976 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
DDX39B-213ENST00000456976 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
DDX39B-213ENST00000456976 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
DDX39B-213ENST00000456976 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
DDX39B-213ENST00000456976 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
DDX39B-213ENST00000456976 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
DDX39B-213ENST00000456976 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
DDX39B-213ENST00000456976 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
DDX39B-213ENST00000456976 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
DDX39B-213ENST00000456976 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
DDX39B-213ENST00000456976 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
DDX39B-213ENST00000456976 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
DDX39B-213ENST00000456976 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
DDX39B-213ENST00000456976 KDM6BO15054 1643 aa22.29■■□□□ 1.16
DDX39B-213ENST00000456976 NUP160Q12769 1436 aa22.26■■□□□ 1.15
DDX39B-213ENST00000456976 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
DDX39B-213ENST00000456976 PBRM1Q86U86 1689 aa22.25■■□□□ 1.15
DDX39B-213ENST00000456976 CUX1P39880 1505 aa22.25■■□□□ 1.15
DDX39B-213ENST00000456976 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
DDX39B-213ENST00000456976 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
DDX39B-213ENST00000456976 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
DDX39B-213ENST00000456976 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
DDX39B-213ENST00000456976 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms