RNA–Protein interactions for RNA: ENST00000401609.5

RPL3-202, Transcript of ribosomal protein L3, humanhuman

TSL 1 (best) BASIC

Gene RPL3, Length 1,289 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-202ENST00000401609 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.23
RPL3-202ENST00000401609 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
RPL3-202ENST00000401609 ABCC9O60706 1549 aa31.05■■■□□ 2.56
RPL3-202ENST00000401609 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
RPL3-202ENST00000401609 NACADO15069 1562 aa29.72■■■□□ 2.35
RPL3-202ENST00000401609 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
RPL3-202ENST00000401609 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
RPL3-202ENST00000401609 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
RPL3-202ENST00000401609 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
RPL3-202ENST00000401609 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
RPL3-202ENST00000401609 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
RPL3-202ENST00000401609 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
RPL3-202ENST00000401609 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
RPL3-202ENST00000401609 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
RPL3-202ENST00000401609 SCRIBQ14160 1630 aa28.64■■■□□ 2.18
RPL3-202ENST00000401609 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
RPL3-202ENST00000401609 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
RPL3-202ENST00000401609 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
RPL3-202ENST00000401609 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
RPL3-202ENST00000401609 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
RPL3-202ENST00000401609 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
RPL3-202ENST00000401609 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
RPL3-202ENST00000401609 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
RPL3-202ENST00000401609 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
RPL3-202ENST00000401609 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
RPL3-202ENST00000401609 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
RPL3-202ENST00000401609 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
RPL3-202ENST00000401609 WIZO95785 1651 aa26.82■■□□□ 1.88
RPL3-202ENST00000401609 NESP48681 1621 aa26.79■■□□□ 1.88
RPL3-202ENST00000401609 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
RPL3-202ENST00000401609 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
RPL3-202ENST00000401609 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
RPL3-202ENST00000401609 CUX2O14529 1486 aa26.71■■□□□ 1.87
RPL3-202ENST00000401609 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
RPL3-202ENST00000401609 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
RPL3-202ENST00000401609 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
RPL3-202ENST00000401609 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
RPL3-202ENST00000401609 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
RPL3-202ENST00000401609 CFTRP13569 1480 aa26.37■■□□□ 1.81
RPL3-202ENST00000401609 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
RPL3-202ENST00000401609 WDR62O43379 1518 aa26.26■■□□□ 1.79
RPL3-202ENST00000401609 DNAJC5Q9H3Z4 198 aa26.26■■□□□ 1.79
RPL3-202ENST00000401609 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
RPL3-202ENST00000401609 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
RPL3-202ENST00000401609 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
RPL3-202ENST00000401609 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
RPL3-202ENST00000401609 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
RPL3-202ENST00000401609 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
RPL3-202ENST00000401609 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
RPL3-202ENST00000401609 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
RPL3-202ENST00000401609 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
RPL3-202ENST00000401609 ZNF608Q9ULD9 1512 aaPredicted RBP25.62■■□□□ 1.69
RPL3-202ENST00000401609 SUPT5HO00267 1087 aaKnown RBP25.61■■□□□ 1.69
RPL3-202ENST00000401609 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
RPL3-202ENST00000401609 POLA1P09884 1462 aaPredicted RBP25.56■■□□□ 1.68
RPL3-202ENST00000401609 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
RPL3-202ENST00000401609 CUX1P39880 1505 aa25.48■■□□□ 1.67
RPL3-202ENST00000401609 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
RPL3-202ENST00000401609 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
RPL3-202ENST00000401609 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
RPL3-202ENST00000401609 SOGA1O94964 1423 aa25.41■■□□□ 1.66
RPL3-202ENST00000401609 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.666e-8■■■■■ 40.8
RPL3-202ENST00000401609 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
RPL3-202ENST00000401609 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
RPL3-202ENST00000401609 CHD1O14646 1710 aa25.26■■□□□ 1.63
RPL3-202ENST00000401609 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
RPL3-202ENST00000401609 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
RPL3-202ENST00000401609 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
RPL3-202ENST00000401609 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
RPL3-202ENST00000401609 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
RPL3-202ENST00000401609 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
RPL3-202ENST00000401609 WRNQ14191 1432 aaPredicted RBP eCLIP25.17■■□□□ 1.62
RPL3-202ENST00000401609 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
RPL3-202ENST00000401609 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
RPL3-202ENST00000401609 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
RPL3-202ENST00000401609 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
RPL3-202ENST00000401609 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
RPL3-202ENST00000401609 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
RPL3-202ENST00000401609 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
RPL3-202ENST00000401609 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
RPL3-202ENST00000401609 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
RPL3-202ENST00000401609 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
RPL3-202ENST00000401609 FBLN2P98095 1184 aa25.06■■□□□ 1.6
RPL3-202ENST00000401609 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
RPL3-202ENST00000401609 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
RPL3-202ENST00000401609 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
RPL3-202ENST00000401609 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
RPL3-202ENST00000401609 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
RPL3-202ENST00000401609 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
RPL3-202ENST00000401609 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
RPL3-202ENST00000401609 NUP160Q12769 1436 aa24.81■■□□□ 1.56
RPL3-202ENST00000401609 CYB5RLQ6IPT4 315 aa24.79■■□□□ 1.56
RPL3-202ENST00000401609 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
RPL3-202ENST00000401609 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
RPL3-202ENST00000401609 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
RPL3-202ENST00000401609 IGF1RP08069 1367 aa24.63■■□□□ 1.53
RPL3-202ENST00000401609 CUL7Q14999 1698 aa24.61■■□□□ 1.53
RPL3-202ENST00000401609 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
RPL3-202ENST00000401609 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
RPL3-202ENST00000401609 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms