RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
DDX39B-209ENST00000428450 ABCC9O60706 1549 aa27.71■■■□□ 2.03
DDX39B-209ENST00000428450 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
DDX39B-209ENST00000428450 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
DDX39B-209ENST00000428450 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
DDX39B-209ENST00000428450 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
DDX39B-209ENST00000428450 NACADO15069 1562 aa25.72■■□□□ 1.71
DDX39B-209ENST00000428450 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
DDX39B-209ENST00000428450 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
DDX39B-209ENST00000428450 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
DDX39B-209ENST00000428450 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
DDX39B-209ENST00000428450 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
DDX39B-209ENST00000428450 CC2D2AQ9P2K1 1620 aa24.98■■□□□ 1.59
DDX39B-209ENST00000428450 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
DDX39B-209ENST00000428450 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
DDX39B-209ENST00000428450 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
DDX39B-209ENST00000428450 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
DDX39B-209ENST00000428450 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
DDX39B-209ENST00000428450 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
DDX39B-209ENST00000428450 CUX2O14529 1486 aa24.14■■□□□ 1.46
DDX39B-209ENST00000428450 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
DDX39B-209ENST00000428450 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
DDX39B-209ENST00000428450 NESP48681 1621 aa23.64■■□□□ 1.38
DDX39B-209ENST00000428450 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
DDX39B-209ENST00000428450 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
DDX39B-209ENST00000428450 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
DDX39B-209ENST00000428450 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
DDX39B-209ENST00000428450 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
DDX39B-209ENST00000428450 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
DDX39B-209ENST00000428450 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
DDX39B-209ENST00000428450 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
DDX39B-209ENST00000428450 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
DDX39B-209ENST00000428450 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
DDX39B-209ENST00000428450 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
DDX39B-209ENST00000428450 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
DDX39B-209ENST00000428450 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
DDX39B-209ENST00000428450 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
DDX39B-209ENST00000428450 WDR62O43379 1518 aa23.03■■□□□ 1.28
DDX39B-209ENST00000428450 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
DDX39B-209ENST00000428450 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
DDX39B-209ENST00000428450 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
DDX39B-209ENST00000428450 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
DDX39B-209ENST00000428450 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
DDX39B-209ENST00000428450 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
DDX39B-209ENST00000428450 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
DDX39B-209ENST00000428450 WIZO95785 1651 aa22.65■■□□□ 1.22
DDX39B-209ENST00000428450 CFTRP13569 1480 aa22.65■■□□□ 1.22
DDX39B-209ENST00000428450 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
DDX39B-209ENST00000428450 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
DDX39B-209ENST00000428450 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
DDX39B-209ENST00000428450 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
DDX39B-209ENST00000428450 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
DDX39B-209ENST00000428450 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
DDX39B-209ENST00000428450 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
DDX39B-209ENST00000428450 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
DDX39B-209ENST00000428450 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
DDX39B-209ENST00000428450 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
DDX39B-209ENST00000428450 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
DDX39B-209ENST00000428450 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
DDX39B-209ENST00000428450 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
DDX39B-209ENST00000428450 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.141e-7■■■■■ 33.6
DDX39B-209ENST00000428450 CHD1O14646 1710 aa22.19■■□□□ 1.14
DDX39B-209ENST00000428450 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
DDX39B-209ENST00000428450 FBLN2P98095 1184 aa22.14■■□□□ 1.13
DDX39B-209ENST00000428450 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
DDX39B-209ENST00000428450 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
DDX39B-209ENST00000428450 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
DDX39B-209ENST00000428450 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
DDX39B-209ENST00000428450 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
DDX39B-209ENST00000428450 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
DDX39B-209ENST00000428450 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
DDX39B-209ENST00000428450 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
DDX39B-209ENST00000428450 SOGA1O94964 1423 aa21.89■■□□□ 1.09
DDX39B-209ENST00000428450 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
DDX39B-209ENST00000428450 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
DDX39B-209ENST00000428450 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
DDX39B-209ENST00000428450 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
DDX39B-209ENST00000428450 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
DDX39B-209ENST00000428450 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
DDX39B-209ENST00000428450 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
DDX39B-209ENST00000428450 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
DDX39B-209ENST00000428450 CUX1P39880 1505 aa21.63■■□□□ 1.05
DDX39B-209ENST00000428450 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
DDX39B-209ENST00000428450 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
DDX39B-209ENST00000428450 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
DDX39B-209ENST00000428450 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
DDX39B-209ENST00000428450 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
DDX39B-209ENST00000428450 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
DDX39B-209ENST00000428450 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
DDX39B-209ENST00000428450 NUP160Q12769 1436 aa21.46■■□□□ 1.03
DDX39B-209ENST00000428450 SHROOM2Q13796 1616 aa21.4■■□□□ 1.02
DDX39B-209ENST00000428450 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
DDX39B-209ENST00000428450 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
DDX39B-209ENST00000428450 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
DDX39B-209ENST00000428450 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
DDX39B-209ENST00000428450 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
DDX39B-209ENST00000428450 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
DDX39B-209ENST00000428450 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
DDX39B-209ENST00000428450 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
DDX39B-209ENST00000428450 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms