RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
DDX39B-204ENST00000418897 ABCC9O60706 1549 aa29.09■■■□□ 2.25
DDX39B-204ENST00000418897 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
DDX39B-204ENST00000418897 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
DDX39B-204ENST00000418897 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
DDX39B-204ENST00000418897 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
DDX39B-204ENST00000418897 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
DDX39B-204ENST00000418897 NACADO15069 1562 aa26.75■■□□□ 1.87
DDX39B-204ENST00000418897 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
DDX39B-204ENST00000418897 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
DDX39B-204ENST00000418897 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
DDX39B-204ENST00000418897 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
DDX39B-204ENST00000418897 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
DDX39B-204ENST00000418897 MYO15BQ96JP2 1530 aa26.08■■□□□ 1.77
DDX39B-204ENST00000418897 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
DDX39B-204ENST00000418897 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
DDX39B-204ENST00000418897 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
DDX39B-204ENST00000418897 CUX2O14529 1486 aa25.53■■□□□ 1.68
DDX39B-204ENST00000418897 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
DDX39B-204ENST00000418897 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
DDX39B-204ENST00000418897 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
DDX39B-204ENST00000418897 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
DDX39B-204ENST00000418897 NCAPD3P42695 1498 aa24.78■■□□□ 1.56
DDX39B-204ENST00000418897 NESP48681 1621 aa24.71■■□□□ 1.55
DDX39B-204ENST00000418897 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
DDX39B-204ENST00000418897 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
DDX39B-204ENST00000418897 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
DDX39B-204ENST00000418897 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
DDX39B-204ENST00000418897 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
DDX39B-204ENST00000418897 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
DDX39B-204ENST00000418897 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
DDX39B-204ENST00000418897 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
DDX39B-204ENST00000418897 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
DDX39B-204ENST00000418897 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
DDX39B-204ENST00000418897 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
DDX39B-204ENST00000418897 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
DDX39B-204ENST00000418897 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
DDX39B-204ENST00000418897 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
DDX39B-204ENST00000418897 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
DDX39B-204ENST00000418897 WDR62O43379 1518 aa24■■□□□ 1.43
DDX39B-204ENST00000418897 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
DDX39B-204ENST00000418897 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
DDX39B-204ENST00000418897 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
DDX39B-204ENST00000418897 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
DDX39B-204ENST00000418897 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
DDX39B-204ENST00000418897 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
DDX39B-204ENST00000418897 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
DDX39B-204ENST00000418897 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
DDX39B-204ENST00000418897 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
DDX39B-204ENST00000418897 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
DDX39B-204ENST00000418897 WIZO95785 1651 aa23.54■■□□□ 1.36
DDX39B-204ENST00000418897 CFTRP13569 1480 aa23.53■■□□□ 1.36
DDX39B-204ENST00000418897 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
DDX39B-204ENST00000418897 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
DDX39B-204ENST00000418897 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
DDX39B-204ENST00000418897 FBLN2P98095 1184 aa23.33■■□□□ 1.33
DDX39B-204ENST00000418897 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
DDX39B-204ENST00000418897 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.31e-7■■■■□ 25.7
DDX39B-204ENST00000418897 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
DDX39B-204ENST00000418897 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
DDX39B-204ENST00000418897 CHD1O14646 1710 aa23.13■■□□□ 1.29
DDX39B-204ENST00000418897 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
DDX39B-204ENST00000418897 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
DDX39B-204ENST00000418897 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
DDX39B-204ENST00000418897 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
DDX39B-204ENST00000418897 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
DDX39B-204ENST00000418897 CHMP7Q8WUX9 453 aaPredicted RBP22.98■■□□□ 1.27
DDX39B-204ENST00000418897 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
DDX39B-204ENST00000418897 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
DDX39B-204ENST00000418897 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
DDX39B-204ENST00000418897 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
DDX39B-204ENST00000418897 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
DDX39B-204ENST00000418897 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
DDX39B-204ENST00000418897 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
DDX39B-204ENST00000418897 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
DDX39B-204ENST00000418897 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
DDX39B-204ENST00000418897 SOGA1O94964 1423 aa22.79■■□□□ 1.24
DDX39B-204ENST00000418897 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
DDX39B-204ENST00000418897 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
DDX39B-204ENST00000418897 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
DDX39B-204ENST00000418897 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
DDX39B-204ENST00000418897 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
DDX39B-204ENST00000418897 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
DDX39B-204ENST00000418897 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
DDX39B-204ENST00000418897 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
DDX39B-204ENST00000418897 CUX1P39880 1505 aa22.47■■□□□ 1.19
DDX39B-204ENST00000418897 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
DDX39B-204ENST00000418897 KIF13AQ9H1H9 1805 aa22.42■■□□□ 1.18
DDX39B-204ENST00000418897 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
DDX39B-204ENST00000418897 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
DDX39B-204ENST00000418897 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
DDX39B-204ENST00000418897 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
DDX39B-204ENST00000418897 NUP160Q12769 1436 aa22.31■■□□□ 1.16
DDX39B-204ENST00000418897 KDM6BO15054 1643 aa22.29■■□□□ 1.16
DDX39B-204ENST00000418897 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
DDX39B-204ENST00000418897 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
DDX39B-204ENST00000418897 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
DDX39B-204ENST00000418897 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
DDX39B-204ENST00000418897 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
DDX39B-204ENST00000418897 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms