RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 NISCHQ9Y2I1 1504 aa51.05■■■■■ 5.76
SNHG6-205ENST00000521399 ABCC9O60706 1549 aa45.87■■■■■ 4.93
SNHG6-205ENST00000521399 CCDC180Q9P1Z9 1646 aa45.82■■■■■ 4.93
SNHG6-205ENST00000521399 RB1CC1Q8TDY2 1594 aa43.65■■■■■ 4.58
SNHG6-205ENST00000521399 NACADO15069 1562 aa43.35■■■■■ 4.53
SNHG6-205ENST00000521399 DCAF8L2P0C7V8 631 aa43.11■■■■■ 4.49
SNHG6-205ENST00000521399 DNAJC5BQ9UF47 199 aa43.11■■■■■ 4.49
SNHG6-205ENST00000521399 MYO15BQ96JP2 1530 aa42.75■■■■■ 4.43
SNHG6-205ENST00000521399 PABPN1Q86U42 306 aaKnown RBP eCLIP42.72■■■■■ 4.43
SNHG6-205ENST00000521399 UNC13AQ9UPW8 1703 aa42.67■■■■■ 4.42
SNHG6-205ENST00000521399 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
SNHG6-205ENST00000521399 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
SNHG6-205ENST00000521399 DCAF1Q9Y4B6 1507 aa42.18■■■■■ 4.34
SNHG6-205ENST00000521399 SHROOM4Q9ULL8 1493 aa41.82■■■■■ 4.29
SNHG6-205ENST00000521399 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
SNHG6-205ENST00000521399 CC2D2AQ9P2K1 1620 aa41.45■■■■■ 4.23
SNHG6-205ENST00000521399 EIF4G1Q04637 1599 aaKnown RBP41.35■■■■■ 4.21
SNHG6-205ENST00000521399 CECR2Q9BXF3 1484 aa41.34■■■■■ 4.21
SNHG6-205ENST00000521399 NCAPD3P42695 1498 aa40.03■■■■■ 4
SNHG6-205ENST00000521399 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
SNHG6-205ENST00000521399 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
SNHG6-205ENST00000521399 SMARCA2P51531 1590 aa39.77■■■■□ 3.96
SNHG6-205ENST00000521399 HMGXB3Q12766 1538 aa39.71■■■■□ 3.95
SNHG6-205ENST00000521399 DNAJC5Q9H3Z4 198 aa39.63■■■■□ 3.93
SNHG6-205ENST00000521399 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.93
SNHG6-205ENST00000521399 ERCC6Q03468 1493 aa39.61■■■■□ 3.93
SNHG6-205ENST00000521399 CUX2O14529 1486 aa39.58■■■■□ 3.93
SNHG6-205ENST00000521399 BAZ1BQ9UIG0 1483 aaKnown RBP39.49■■■■□ 3.91
SNHG6-205ENST00000521399 PEG3Q9GZU2 1588 aa39.46■■■■□ 3.91
SNHG6-205ENST00000521399 NESP48681 1621 aa39.4■■■■□ 3.9
SNHG6-205ENST00000521399 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
SNHG6-205ENST00000521399 LAMC3Q9Y6N6 1575 aa39.12■■■■□ 3.85
SNHG6-205ENST00000521399 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
SNHG6-205ENST00000521399 PDS5BQ9NTI5 1447 aa38.91■■■■□ 3.82
SNHG6-205ENST00000521399 KIF21AQ7Z4S6 1674 aa38.88■■■■□ 3.81
SNHG6-205ENST00000521399 WIZO95785 1651 aa38.85■■■■□ 3.81
SNHG6-205ENST00000521399 CADPSQ9ULU8 1353 aa38.81■■■■□ 3.8
SNHG6-205ENST00000521399 MRC2Q9UBG0 1479 aa38.56■■■■□ 3.76
SNHG6-205ENST00000521399 RSF1Q96T23 1441 aaPredicted RBP38.5■■■■□ 3.75
SNHG6-205ENST00000521399 WDR62O43379 1518 aa38.48■■■■□ 3.75
SNHG6-205ENST00000521399 CEP164Q9UPV0 1460 aa38.4■■■■□ 3.74
SNHG6-205ENST00000521399 TOP2AP11388 1531 aaKnown RBP38.36■■■■□ 3.73
SNHG6-205ENST00000521399 CFTRP13569 1480 aa38.35■■■■□ 3.73
SNHG6-205ENST00000521399 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
SNHG6-205ENST00000521399 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
SNHG6-205ENST00000521399 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
SNHG6-205ENST00000521399 CCDC88BA6NC98 1476 aa37.94■■■■□ 3.66
SNHG6-205ENST00000521399 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
SNHG6-205ENST00000521399 OSCARQ8IYS5 282 aa37.78■■■■□ 3.64
SNHG6-205ENST00000521399 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
SNHG6-205ENST00000521399 TOPBP1Q92547 1522 aa37.62■■■■□ 3.61
SNHG6-205ENST00000521399 ZNF608Q9ULD9 1512 aaPredicted RBP37.58■■■■□ 3.61
SNHG6-205ENST00000521399 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
SNHG6-205ENST00000521399 DNMBPQ6XZF7 1577 aa37.47■■■■□ 3.59
SNHG6-205ENST00000521399 EIF4G3O43432 1585 aaKnown RBP37.36■■■■□ 3.57
SNHG6-205ENST00000521399 TARBP1Q13395 1621 aaKnown RBP37.3■■■■□ 3.56
SNHG6-205ENST00000521399 RIMBP3CA6NJZ7 1639 aa37.26■■■■□ 3.56
SNHG6-205ENST00000521399 RIMBP3BA6NNM3 1639 aa37.26■■■■□ 3.56
SNHG6-205ENST00000521399 RIMBP3Q9UFD9 1639 aa37.26■■■■□ 3.56
SNHG6-205ENST00000521399 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.555e-12■■■■□ 23.1
SNHG6-205ENST00000521399 POLA1P09884 1462 aaPredicted RBP37.24■■■■□ 3.55
SNHG6-205ENST00000521399 ARHGEF11O15085 1522 aa37.15■■■■□ 3.54
SNHG6-205ENST00000521399 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
SNHG6-205ENST00000521399 CHD1O14646 1710 aa37.1■■■■□ 3.53
SNHG6-205ENST00000521399 SOGA1O94964 1423 aa37.07■■■■□ 3.52
SNHG6-205ENST00000521399 FBLN2P98095 1184 aa37■■■■□ 3.51
SNHG6-205ENST00000521399 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
SNHG6-205ENST00000521399 FGD5Q6ZNL6 1462 aa37■■■■□ 3.51
SNHG6-205ENST00000521399 CUX1P39880 1505 aa36.95■■■■□ 3.51
SNHG6-205ENST00000521399 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
SNHG6-205ENST00000521399 CYB5RLQ6IPT4 315 aa36.89■■■■□ 3.5
SNHG6-205ENST00000521399 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
SNHG6-205ENST00000521399 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
SNHG6-205ENST00000521399 MAGI1Q96QZ7 1491 aaPredicted RBP36.76■■■■□ 3.48
SNHG6-205ENST00000521399 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
SNHG6-205ENST00000521399 SUPT5HO00267 1087 aaKnown RBP36.74■■■■□ 3.47
SNHG6-205ENST00000521399 CHMP7Q8WUX9 453 aaPredicted RBP36.73■■■■□ 3.47
SNHG6-205ENST00000521399 CLASP1Q7Z460 1538 aa36.68■■■■□ 3.46
SNHG6-205ENST00000521399 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
SNHG6-205ENST00000521399 SYNJ2O15056 1496 aa36.63■■■■□ 3.45
SNHG6-205ENST00000521399 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
SNHG6-205ENST00000521399 PBRM1Q86U86 1689 aa36.59■■■■□ 3.45
SNHG6-205ENST00000521399 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
SNHG6-205ENST00000521399 ABCA5Q8WWZ7 1642 aa36.52■■■■□ 3.44
SNHG6-205ENST00000521399 TRHP20396 242 aaPredicted RBP36.48■■■■□ 3.43
SNHG6-205ENST00000521399 WRNQ14191 1432 aaPredicted RBP eCLIP36.42■■■■□ 3.428e-6■■■■■ 29.7
SNHG6-205ENST00000521399 TOP2BQ02880 1626 aa36.35■■■■□ 3.41
SNHG6-205ENST00000521399 BIVM-ERCC5R4GMW8 1640 aa36.35■■■■□ 3.41
SNHG6-205ENST00000521399 GRIN2AQ12879 1464 aa36.29■■■■□ 3.4
SNHG6-205ENST00000521399 ADAMTS12P58397 1594 aa36.24■■■■□ 3.39
SNHG6-205ENST00000521399 NUP160Q12769 1436 aa36.17■■■■□ 3.38
SNHG6-205ENST00000521399 FHAD1B1AJZ9 1412 aa36.16■■■■□ 3.38
SNHG6-205ENST00000521399 CEP170Q5SW79 1584 aa36.15■■■■□ 3.38
SNHG6-205ENST00000521399 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
SNHG6-205ENST00000521399 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
SNHG6-205ENST00000521399 SHROOM2Q13796 1616 aa36.01■■■■□ 3.35
SNHG6-205ENST00000521399 PRG4Q92954 1404 aaPredicted RBP35.82■■■■□ 3.32
SNHG6-205ENST00000521399 JPH4Q96JJ6 628 aa35.81■■■■□ 3.32
SNHG6-205ENST00000521399 RUSC2Q8N2Y8 1516 aa35.73■■■■□ 3.31
SNHG6-205ENST00000521399 IGF1RP08069 1367 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms