RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
BHLHE40-201ENST00000256495 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.34
BHLHE40-201ENST00000256495 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
BHLHE40-201ENST00000256495 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
BHLHE40-201ENST00000256495 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
BHLHE40-201ENST00000256495 ABCC9O60706 1549 aa21.83■■□□□ 1.09
BHLHE40-201ENST00000256495 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
BHLHE40-201ENST00000256495 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
BHLHE40-201ENST00000256495 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
BHLHE40-201ENST00000256495 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.98
BHLHE40-201ENST00000256495 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
BHLHE40-201ENST00000256495 FAM9AQ8IZU1 332 aaPredicted RBP21.05■□□□□ 0.96
BHLHE40-201ENST00000256495 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.93
BHLHE40-201ENST00000256495 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
BHLHE40-201ENST00000256495 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
BHLHE40-201ENST00000256495 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
BHLHE40-201ENST00000256495 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
BHLHE40-201ENST00000256495 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
BHLHE40-201ENST00000256495 NACADO15069 1562 aa20.62■□□□□ 0.89
BHLHE40-201ENST00000256495 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
BHLHE40-201ENST00000256495 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
BHLHE40-201ENST00000256495 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
BHLHE40-201ENST00000256495 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
BHLHE40-201ENST00000256495 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
BHLHE40-201ENST00000256495 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
BHLHE40-201ENST00000256495 WIZO95785 1651 aa20.25■□□□□ 0.83
BHLHE40-201ENST00000256495 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
BHLHE40-201ENST00000256495 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
BHLHE40-201ENST00000256495 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
BHLHE40-201ENST00000256495 ABCC8Q09428 1581 aa19.89■□□□□ 0.78
BHLHE40-201ENST00000256495 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
BHLHE40-201ENST00000256495 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
BHLHE40-201ENST00000256495 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
BHLHE40-201ENST00000256495 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
BHLHE40-201ENST00000256495 SOGA1O94964 1423 aa19.73■□□□□ 0.75
BHLHE40-201ENST00000256495 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
BHLHE40-201ENST00000256495 TRIM26Q12899 539 aaPredicted RBP19.71■□□□□ 0.75
BHLHE40-201ENST00000256495 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
BHLHE40-201ENST00000256495 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
BHLHE40-201ENST00000256495 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
BHLHE40-201ENST00000256495 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
BHLHE40-201ENST00000256495 HRCP23327 699 aa19.61■□□□□ 0.73
BHLHE40-201ENST00000256495 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
BHLHE40-201ENST00000256495 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
BHLHE40-201ENST00000256495 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
BHLHE40-201ENST00000256495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
BHLHE40-201ENST00000256495 APLP2Q06481 763 aa19.46■□□□□ 0.71
BHLHE40-201ENST00000256495 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
BHLHE40-201ENST00000256495 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
BHLHE40-201ENST00000256495 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
BHLHE40-201ENST00000256495 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
BHLHE40-201ENST00000256495 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
BHLHE40-201ENST00000256495 ITGAEP38570 1179 aa19.3■□□□□ 0.68
BHLHE40-201ENST00000256495 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
BHLHE40-201ENST00000256495 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
BHLHE40-201ENST00000256495 NESP48681 1621 aa19.16■□□□□ 0.66
BHLHE40-201ENST00000256495 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
BHLHE40-201ENST00000256495 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
BHLHE40-201ENST00000256495 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
BHLHE40-201ENST00000256495 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
BHLHE40-201ENST00000256495 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
BHLHE40-201ENST00000256495 ARID3CA6NKF2 412 aa19.14■□□□□ 0.65
BHLHE40-201ENST00000256495 CLIP1P30622 1438 aa19.14■□□□□ 0.65
BHLHE40-201ENST00000256495 GOLGA3Q08378 1498 aa19.13■□□□□ 0.65
BHLHE40-201ENST00000256495 CUX2O14529 1486 aa19.07■□□□□ 0.64
BHLHE40-201ENST00000256495 EEA1Q15075 1411 aa19.05■□□□□ 0.64
BHLHE40-201ENST00000256495 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
BHLHE40-201ENST00000256495 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
BHLHE40-201ENST00000256495 FBLN2P98095 1184 aa19.02■□□□□ 0.63
BHLHE40-201ENST00000256495 CFTRP13569 1480 aa19.02■□□□□ 0.63
BHLHE40-201ENST00000256495 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
BHLHE40-201ENST00000256495 CUX1P39880 1505 aa18.99■□□□□ 0.63
BHLHE40-201ENST00000256495 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
BHLHE40-201ENST00000256495 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
BHLHE40-201ENST00000256495 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
BHLHE40-201ENST00000256495 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
BHLHE40-201ENST00000256495 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
BHLHE40-201ENST00000256495 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
BHLHE40-201ENST00000256495 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
BHLHE40-201ENST00000256495 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
BHLHE40-201ENST00000256495 IGF1RP08069 1367 aa18.86■□□□□ 0.61
BHLHE40-201ENST00000256495 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
BHLHE40-201ENST00000256495 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
BHLHE40-201ENST00000256495 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
BHLHE40-201ENST00000256495 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
BHLHE40-201ENST00000256495 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
BHLHE40-201ENST00000256495 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
BHLHE40-201ENST00000256495 KIF21BO75037 1637 aa18.67■□□□□ 0.58
BHLHE40-201ENST00000256495 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
BHLHE40-201ENST00000256495 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
BHLHE40-201ENST00000256495 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.581e-8■■■■■ 47.1
BHLHE40-201ENST00000256495 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
BHLHE40-201ENST00000256495 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
BHLHE40-201ENST00000256495 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
BHLHE40-201ENST00000256495 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
BHLHE40-201ENST00000256495 YTHDC1Q96MU7 727 aaKnown RBP18.59■□□□□ 0.57
BHLHE40-201ENST00000256495 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
BHLHE40-201ENST00000256495 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
BHLHE40-201ENST00000256495 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
BHLHE40-201ENST00000256495 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms