RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
SNHG6-203ENST00000520944 CCDC180Q9P1Z9 1646 aa45.15■■■■■ 4.82
SNHG6-203ENST00000520944 ABCC9O60706 1549 aa44.96■■■■■ 4.79
SNHG6-203ENST00000520944 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
SNHG6-203ENST00000520944 DCAF8L2P0C7V8 631 aa42.8■■■■■ 4.44
SNHG6-203ENST00000520944 NACADO15069 1562 aa42.7■■■■■ 4.43
SNHG6-203ENST00000520944 MYO15BQ96JP2 1530 aa42.22■■■■■ 4.35
SNHG6-203ENST00000520944 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
SNHG6-203ENST00000520944 ZCCHC6Q5VYS8 1495 aaKnown RBP41.97■■■■■ 4.31
SNHG6-203ENST00000520944 DNAJC5BQ9UF47 199 aa41.9■■■■■ 4.3
SNHG6-203ENST00000520944 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
SNHG6-203ENST00000520944 UNC13AQ9UPW8 1703 aa41.75■■■■■ 4.27
SNHG6-203ENST00000520944 BICRAQ9NZM4 1560 aa41.57■■■■■ 4.25
SNHG6-203ENST00000520944 SCRIBQ14160 1630 aa41.22■■■■■ 4.19
SNHG6-203ENST00000520944 SHROOM4Q9ULL8 1493 aa41.13■■■■■ 4.17
SNHG6-203ENST00000520944 EIF4G1Q04637 1599 aaKnown RBP40.57■■■■■ 4.09
SNHG6-203ENST00000520944 CC2D2AQ9P2K1 1620 aa40.56■■■■■ 4.08
SNHG6-203ENST00000520944 CECR2Q9BXF3 1484 aa40.48■■■■■ 4.07
SNHG6-203ENST00000520944 NCAPD3P42695 1498 aa39.46■■■■□ 3.91
SNHG6-203ENST00000520944 ATAD2BQ9ULI0 1458 aa39.37■■■■□ 3.89
SNHG6-203ENST00000520944 SMARCA4P51532 1647 aa39.34■■■■□ 3.89
SNHG6-203ENST00000520944 SMARCA2P51531 1590 aa39.27■■■■□ 3.88
SNHG6-203ENST00000520944 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
SNHG6-203ENST00000520944 HMGXB3Q12766 1538 aa39.13■■■■□ 3.85
SNHG6-203ENST00000520944 BAZ1BQ9UIG0 1483 aaKnown RBP39.03■■■■□ 3.84
SNHG6-203ENST00000520944 MROH2BQ7Z745 1585 aa38.97■■■■□ 3.83
SNHG6-203ENST00000520944 PEG3Q9GZU2 1588 aa38.95■■■■□ 3.83
SNHG6-203ENST00000520944 ERCC6Q03468 1493 aa38.86■■■■□ 3.81
SNHG6-203ENST00000520944 NESP48681 1621 aa38.68■■■■□ 3.78
SNHG6-203ENST00000520944 CUX2O14529 1486 aa38.61■■■■□ 3.77
SNHG6-203ENST00000520944 WIZO95785 1651 aa38.48■■■■□ 3.75
SNHG6-203ENST00000520944 LAMC3Q9Y6N6 1575 aa38.47■■■■□ 3.75
SNHG6-203ENST00000520944 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
SNHG6-203ENST00000520944 PDS5BQ9NTI5 1447 aa38.35■■■■□ 3.73
SNHG6-203ENST00000520944 CADPSQ9ULU8 1353 aa38.32■■■■□ 3.73
SNHG6-203ENST00000520944 DNAJC5Q9H3Z4 198 aa38.29■■■■□ 3.72
SNHG6-203ENST00000520944 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
SNHG6-203ENST00000520944 KIF21AQ7Z4S6 1674 aa38.1■■■■□ 3.69
SNHG6-203ENST00000520944 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
SNHG6-203ENST00000520944 MRC2Q9UBG0 1479 aa37.92■■■■□ 3.66
SNHG6-203ENST00000520944 CFTRP13569 1480 aa37.9■■■■□ 3.66
SNHG6-203ENST00000520944 CEP164Q9UPV0 1460 aa37.85■■■■□ 3.65
SNHG6-203ENST00000520944 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
SNHG6-203ENST00000520944 WDR62O43379 1518 aa37.76■■■■□ 3.63
SNHG6-203ENST00000520944 CCDC88BA6NC98 1476 aa37.68■■■■□ 3.62
SNHG6-203ENST00000520944 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
SNHG6-203ENST00000520944 PRDM2Q13029 1718 aa37.36■■■■□ 3.57
SNHG6-203ENST00000520944 ABCC8Q09428 1581 aa37.15■■■■□ 3.54
SNHG6-203ENST00000520944 TOPBP1Q92547 1522 aa37.13■■■■□ 3.53
SNHG6-203ENST00000520944 IFT140Q96RY7 1462 aa37.1■■■■□ 3.53
SNHG6-203ENST00000520944 SUPT5HO00267 1087 aaKnown RBP37.04■■■■□ 3.52
SNHG6-203ENST00000520944 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
SNHG6-203ENST00000520944 DNMBPQ6XZF7 1577 aa37■■■■□ 3.51
SNHG6-203ENST00000520944 ZNF608Q9ULD9 1512 aaPredicted RBP36.96■■■■□ 3.51
SNHG6-203ENST00000520944 TRIM41Q8WV44 630 aa36.8■■■■□ 3.48
SNHG6-203ENST00000520944 POLA1P09884 1462 aaPredicted RBP36.77■■■■□ 3.48
SNHG6-203ENST00000520944 AQRO60306 1485 aaKnown RBP eCLIP36.73■■■■□ 3.475e-12■■■■□ 23.1
SNHG6-203ENST00000520944 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
SNHG6-203ENST00000520944 EIF4G3O43432 1585 aaKnown RBP36.7■■■■□ 3.47
SNHG6-203ENST00000520944 SOGA1O94964 1423 aa36.7■■■■□ 3.47
SNHG6-203ENST00000520944 RAD54L2Q9Y4B4 1467 aa36.66■■■■□ 3.46
SNHG6-203ENST00000520944 FGD5Q6ZNL6 1462 aa36.6■■■■□ 3.45
SNHG6-203ENST00000520944 CUX1P39880 1505 aa36.59■■■■□ 3.45
SNHG6-203ENST00000520944 TDRD9Q8NDG6 1382 aaKnown RBP36.58■■■■□ 3.45
SNHG6-203ENST00000520944 FBLN2P98095 1184 aa36.55■■■■□ 3.44
SNHG6-203ENST00000520944 WDR97A6NE52 1622 aa36.4■■■■□ 3.42
SNHG6-203ENST00000520944 SNAPC4Q5SXM2 1469 aa36.32■■■■□ 3.41
SNHG6-203ENST00000520944 CHD1O14646 1710 aa36.32■■■■□ 3.4
SNHG6-203ENST00000520944 CHMP7Q8WUX9 453 aaPredicted RBP36.32■■■■□ 3.4
SNHG6-203ENST00000520944 RIMBP3CA6NJZ7 1639 aa36.32■■■■□ 3.4
SNHG6-203ENST00000520944 RIMBP3BA6NNM3 1639 aa36.32■■■■□ 3.4
SNHG6-203ENST00000520944 RIMBP3Q9UFD9 1639 aa36.32■■■■□ 3.4
SNHG6-203ENST00000520944 GRIN2BQ13224 1484 aa36.31■■■■□ 3.4
SNHG6-203ENST00000520944 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
SNHG6-203ENST00000520944 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
SNHG6-203ENST00000520944 GAPVD1Q14C86 1478 aa36.23■■■■□ 3.39
SNHG6-203ENST00000520944 WRNQ14191 1432 aaPredicted RBP eCLIP36.21■■■■□ 3.398e-6■■■■■ 29.7
SNHG6-203ENST00000520944 ABCA10Q8WWZ4 1543 aa36.21■■■■□ 3.39
SNHG6-203ENST00000520944 CYB5RLQ6IPT4 315 aa36.15■■■■□ 3.38
SNHG6-203ENST00000520944 SYNJ2O15056 1496 aa36.13■■■■□ 3.37
SNHG6-203ENST00000520944 TOP2BQ02880 1626 aa36.09■■■■□ 3.37
SNHG6-203ENST00000520944 SYNJ1O43426 1573 aa36.05■■■■□ 3.36
SNHG6-203ENST00000520944 ABCA5Q8WWZ7 1642 aa36.04■■■■□ 3.36
SNHG6-203ENST00000520944 BIVM-ERCC5R4GMW8 1640 aa36.04■■■■□ 3.36
SNHG6-203ENST00000520944 PBRM1Q86U86 1689 aa36.03■■■■□ 3.36
SNHG6-203ENST00000520944 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
SNHG6-203ENST00000520944 ARAP1Q96P48 1450 aa35.94■■■■□ 3.34
SNHG6-203ENST00000520944 GRIN2AQ12879 1464 aa35.81■■■■□ 3.32
SNHG6-203ENST00000520944 FHAD1B1AJZ9 1412 aa35.8■■■■□ 3.32
SNHG6-203ENST00000520944 ADAMTS12P58397 1594 aa35.76■■■■□ 3.32
SNHG6-203ENST00000520944 ERICH3Q5RHP9 1530 aa35.76■■■■□ 3.31
SNHG6-203ENST00000520944 TRHP20396 242 aaPredicted RBP35.68■■■■□ 3.3
SNHG6-203ENST00000520944 NUP160Q12769 1436 aa35.66■■■■□ 3.3
SNHG6-203ENST00000520944 CEP170Q5SW79 1584 aa35.6■■■■□ 3.29
SNHG6-203ENST00000520944 KIF27Q86VH2 1401 aa35.52■■■■□ 3.28
SNHG6-203ENST00000520944 IGF1RP08069 1367 aa35.46■■■■□ 3.27
SNHG6-203ENST00000520944 JPH4Q96JJ6 628 aa35.44■■■■□ 3.26
SNHG6-203ENST00000520944 ERCC6L2Q5T890 1561 aa35.43■■■■□ 3.26
SNHG6-203ENST00000520944 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
SNHG6-203ENST00000520944 PRG4Q92954 1404 aaPredicted RBP35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms